RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 TOMM70O94826 608 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 ALDH1B1P30837 517 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 HDGFL1Q5TGJ6 251 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 C16orf71Q8IYS4 520 aaPredicted RBP11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
HMGXB4-207ENST00000498212 DDX60Q8IY21 1712 aaKnown RBP11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 GLTPD2A6NH11 291 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 ANP32CO43423 234 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 NTSR2O95665 410 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 ZNF853P0CG23 659 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 HSPA6P17066 643 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 GNAI1P63096 354 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 CRY2Q49AN0 593 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 CCDC93Q567U6 631 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 C7orf43Q8WVR3 580 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 IFT57Q9NWB7 429 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 CHPF2Q9P2E5 772 aa11.02□□□□□ -0.65
HMGXB4-207ENST00000498212 HSP90AB3PQ58FF7 597 aa11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 DUSP27Q5VZP5 1158 aa11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 RPGRQ92834 1020 aaKnown RBP11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 DBF4Q9UBU7 674 aaPredicted RBP11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 TAF1P21675 1872 aa11.01□□□□□ -0.65
HMGXB4-207ENST00000498212 SCN4AP35499 1836 aa11□□□□□ -0.65
HMGXB4-207ENST00000498212 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
HMGXB4-207ENST00000498212 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
HMGXB4-207ENST00000498212 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
HMGXB4-207ENST00000498212 RNF123Q5XPI4 1314 aa11□□□□□ -0.65
HMGXB4-207ENST00000498212 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 FKBP4Q02790 459 aaKnown RBP eCLIP10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 TCIRG1Q13488 830 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 OLFM4Q6UX06 510 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 RTKN2Q8IZC4 609 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 PLBD2Q8NHP8 589 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 HYPKQ9NX55 129 aa10.99□□□□□ -0.65
HMGXB4-207ENST00000498212 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 SNED1Q8TER0 1413 aa10.98□□□□□ -0.65
HMGXB4-207ENST00000498212 FSTL1Q12841 308 aa10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 SH3TC1Q8TE82 1336 aa10.97□□□□□ -0.65
HMGXB4-207ENST00000498212 MYH3P11055 1940 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 APLP1P51693 650 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 GRIPAP1Q4V328 841 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 C8orf58Q8NAV2 365 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 PSMD1Q99460 953 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 CHMP4AQ9BY43 222 aa10.96□□□□□ -0.65
HMGXB4-207ENST00000498212 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 ABCC4O15439 1325 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 POTECB2RU33 542 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 DDNO94850 711 aaPredicted RBP10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 HCLS1P14317 486 aaPredicted RBP10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 RIC3Q7Z5B4 369 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 WWC1Q8IX03 1113 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 PHAXQ9H814 394 aaKnown RBP10.95□□□□□ -0.66
HMGXB4-207ENST00000498212 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
HMGXB4-207ENST00000498212 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
HMGXB4-207ENST00000498212 TSPYL6Q8N831 410 aa10.94□□□□□ -0.66
HMGXB4-207ENST00000498212 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
HMGXB4-207ENST00000498212 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
HMGXB4-207ENST00000498212 IL16Q14005 1332 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 COL4A5P29400 1685 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 DDX46Q7L014 1031 aaKnown RBP10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 JDP2Q8WYK2 163 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 FAM89AQ96GI7 184 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms