RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 NPR1P16066 1061 aa21.48■■□□□ 1.03
ABCF3-218ENST00000498136 NLRP10Q86W26 655 aa21.48■■□□□ 1.03
ABCF3-218ENST00000498136 MIER1Q8N108 512 aa21.48■■□□□ 1.03
ABCF3-218ENST00000498136 ZNF428Q96B54 188 aa21.48■■□□□ 1.03
ABCF3-218ENST00000498136 DDX58O95786 925 aaKnown RBP21.47■■□□□ 1.03
ABCF3-218ENST00000498136 TRMT112Q9UI30 125 aaKnown RBP21.47■■□□□ 1.03
ABCF3-218ENST00000498136 SLX4Q8IY92 1834 aa21.47■■□□□ 1.03
ABCF3-218ENST00000498136 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-218ENST00000498136 ATP5J2-PTCD1G3V325 749 aa21.46■■□□□ 1.03
ABCF3-218ENST00000498136 C21orf2O43822 256 aa21.46■■□□□ 1.03
ABCF3-218ENST00000498136 PRPF40BQ6NWY9 871 aaKnown RBP21.46■■□□□ 1.03
ABCF3-218ENST00000498136 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
ABCF3-218ENST00000498136 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
ABCF3-218ENST00000498136 SLC4A2P04920 1241 aa21.44■■□□□ 1.02
ABCF3-218ENST00000498136 RASSF7Q02833 373 aa21.44■■□□□ 1.02
ABCF3-218ENST00000498136 NLRP3Q96P20 1036 aa21.44■■□□□ 1.02
ABCF3-218ENST00000498136 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
ABCF3-218ENST00000498136 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
ABCF3-218ENST00000498136 VAMP4O75379 141 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 MYD88Q99836 296 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 ISCA1Q9BUE6 129 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 SBF1O95248 1867 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
ABCF3-218ENST00000498136 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
ABCF3-218ENST00000498136 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
ABCF3-218ENST00000498136 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
ABCF3-218ENST00000498136 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 ADCY9O60503 1353 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 HCLS1P14317 486 aaPredicted RBP21.41■■□□□ 1.02
ABCF3-218ENST00000498136 CRY2Q49AN0 593 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
ABCF3-218ENST00000498136 MAP3K2Q9Y2U5 619 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 LAMB2P55268 1798 aa21.41■■□□□ 1.02
ABCF3-218ENST00000498136 E9PSI1 815 aa21.4■■□□□ 1.02
ABCF3-218ENST00000498136 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
ABCF3-218ENST00000498136 SOGA3Q5TF21 947 aa21.4■■□□□ 1.02
ABCF3-218ENST00000498136 G2E3Q7L622 706 aa21.4■■□□□ 1.02
ABCF3-218ENST00000498136 RBM17Q96I25 401 aaKnown RBP21.4■■□□□ 1.02
ABCF3-218ENST00000498136 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.02
ABCF3-218ENST00000498136 PI4KAP2A4QPH2 592 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 SLC10A5Q5PT55 438 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 KSR2Q6VAB6 950 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 C3orf67Q6ZVT6 689 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 PI4KAP1Q8N8J0 262 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 FAM89AQ96GI7 184 aa21.39■■□□□ 1.01
ABCF3-218ENST00000498136 METTL22Q9BUU2 404 aaPredicted RBP21.39■■□□□ 1.01
ABCF3-218ENST00000498136 NFKBIEO00221 500 aa21.38■■□□□ 1.01
ABCF3-218ENST00000498136 NEXNQ0ZGT2 675 aa21.38■■□□□ 1.01
ABCF3-218ENST00000498136 FLIIQ13045 1269 aa21.38■■□□□ 1.01
ABCF3-218ENST00000498136 FKBP5Q13451 457 aaPredicted RBP21.38■■□□□ 1.01
ABCF3-218ENST00000498136 DDX60Q8IY21 1712 aaKnown RBP21.38■■□□□ 1.01
ABCF3-218ENST00000498136 LMNB1P20700 586 aa21.37■■□□□ 1.01
ABCF3-218ENST00000498136 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
ABCF3-218ENST00000498136 CCDC93Q567U6 631 aa21.37■■□□□ 1.01
ABCF3-218ENST00000498136 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-218ENST00000498136 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-218ENST00000498136 CCDC191Q8NCU4 936 aa21.36■■□□□ 1.01
ABCF3-218ENST00000498136 TAOK3Q9H2K8 898 aa21.36■■□□□ 1.01
ABCF3-218ENST00000498136 CWC25Q9NXE8 425 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-218ENST00000498136 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
ABCF3-218ENST00000498136 OLFM4Q6UX06 510 aa21.35■■□□□ 1.01
ABCF3-218ENST00000498136 CRAMP1Q96RY5 1269 aa21.35■■□□□ 1.01
ABCF3-218ENST00000498136 PPEF1O14829 653 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-218ENST00000498136 ZBTB38Q8NAP3 1195 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-218ENST00000498136 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
ABCF3-218ENST00000498136 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
ABCF3-218ENST00000498136 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
ABCF3-218ENST00000498136 IRS4O14654 1257 aaPredicted RBP21.33■■□□□ 1.01
ABCF3-218ENST00000498136 DDX46Q7L014 1031 aaKnown RBP21.33■■□□□ 1.01
ABCF3-218ENST00000498136 TMX4Q9H1E5 349 aaPredicted RBP21.33■■□□□ 1.01
ABCF3-218ENST00000498136 PRELPP51888 382 aa21.32■■□□□ 1
ABCF3-218ENST00000498136 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
ABCF3-218ENST00000498136 DNAAF4Q8WXU2 420 aa21.32■■□□□ 1
ABCF3-218ENST00000498136 ABCC4O15439 1325 aa21.31■■□□□ 1
ABCF3-218ENST00000498136 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
ABCF3-218ENST00000498136 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
ABCF3-218ENST00000498136 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
ABCF3-218ENST00000498136 IGKV5-2P06315 115 aa21.31■■□□□ 1
ABCF3-218ENST00000498136 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
ABCF3-218ENST00000498136 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
ABCF3-218ENST00000498136 JARID2Q92833 1246 aaPredicted RBP21.31■■□□□ 1
ABCF3-218ENST00000498136 TAF1P21675 1872 aa21.3■■□□□ 1
ABCF3-218ENST00000498136 FKBP4Q02790 459 aaKnown RBP eCLIP21.3■■□□□ 1
ABCF3-218ENST00000498136 CC2D2BQ6DHV5 1058 aa21.29■■□□□ 1
ABCF3-218ENST00000498136 NEURL1BA8MQ27 555 aa21.28■■□□□ 1
ABCF3-218ENST00000498136 HNRNPUQ00839 825 aaKnown RBP eCLIP21.28■■□□□ 1
ABCF3-218ENST00000498136 GRAPQ13588 217 aa21.28■■□□□ 1
ABCF3-218ENST00000498136 GRAPLQ8TC17 118 aaPredicted RBP21.28■■□□□ 1
ABCF3-218ENST00000498136 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
ABCF3-218ENST00000498136 ZC3H4Q9UPT8 1303 aaKnown RBP21.28■■□□□ 1
ABCF3-218ENST00000498136 F6X3S4 739 aa21.27■■□□□ 1
ABCF3-218ENST00000498136 BBOX1O75936 387 aa21.27■■□□□ 1
ABCF3-218ENST00000498136 SF3B3Q15393 1217 aaKnown RBP21.27■■□□□ 1
ABCF3-218ENST00000498136 ZNF277Q9NRM2 450 aaPredicted RBP21.27■■□□□ 1
ABCF3-218ENST00000498136 PDE8AO60658 829 aa21.26■□□□□ 0.99
ABCF3-218ENST00000498136 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
ABCF3-218ENST00000498136 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
ABCF3-218ENST00000498136 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms