RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 CWC25Q9NXE8 425 aaPredicted RBP20.32■□□□□ 0.84
SSBP1-214ENST00000498107 SH3TC1Q8TE82 1336 aa20.31■□□□□ 0.84
SSBP1-214ENST00000498107 IPO8O15397 1037 aaKnown RBP20.31■□□□□ 0.84
SSBP1-214ENST00000498107 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
SSBP1-214ENST00000498107 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
SSBP1-214ENST00000498107 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
SSBP1-214ENST00000498107 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
SSBP1-214ENST00000498107 NLGN2Q8NFZ4 835 aa20.3■□□□□ 0.84
SSBP1-214ENST00000498107 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
SSBP1-214ENST00000498107 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
SSBP1-214ENST00000498107 H0YIN7 160 aa20.29■□□□□ 0.84
SSBP1-214ENST00000498107 ERFEQ4G0M1 354 aa20.29■□□□□ 0.84
SSBP1-214ENST00000498107 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
SSBP1-214ENST00000498107 NEURL1BA8MQ27 555 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 F6X3S4 739 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 C2CD5Q86YS7 1000 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 ZBTB38Q8NAP3 1195 aaPredicted RBP20.28■□□□□ 0.84
SSBP1-214ENST00000498107 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
SSBP1-214ENST00000498107 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
SSBP1-214ENST00000498107 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
SSBP1-214ENST00000498107 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
SSBP1-214ENST00000498107 DPEP1P16444 411 aa20.27■□□□□ 0.84
SSBP1-214ENST00000498107 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
SSBP1-214ENST00000498107 SLC4A10Q6U841 1118 aa20.27■□□□□ 0.84
SSBP1-214ENST00000498107 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
SSBP1-214ENST00000498107 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
SSBP1-214ENST00000498107 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
SSBP1-214ENST00000498107 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
SSBP1-214ENST00000498107 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
SSBP1-214ENST00000498107 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
SSBP1-214ENST00000498107 PIM2Q9P1W9 311 aa20.26■□□□□ 0.83
SSBP1-214ENST00000498107 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
SSBP1-214ENST00000498107 BCAR3O75815 825 aa20.25■□□□□ 0.83
SSBP1-214ENST00000498107 GCKRQ14397 625 aa20.25■□□□□ 0.83
SSBP1-214ENST00000498107 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
SSBP1-214ENST00000498107 N4BP2Q86UW6 1770 aaPredicted RBP20.25■□□□□ 0.83
SSBP1-214ENST00000498107 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
SSBP1-214ENST00000498107 CHRNA5P30532 468 aa20.24■□□□□ 0.83
SSBP1-214ENST00000498107 MASTLQ96GX5 879 aa20.24■□□□□ 0.83
SSBP1-214ENST00000498107 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
SSBP1-214ENST00000498107 SRGNP10124 158 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 NPR1P16066 1061 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
SSBP1-214ENST00000498107 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
SSBP1-214ENST00000498107 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
SSBP1-214ENST00000498107 DLEC1Q9Y238 1755 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 KCNA3P22001 575 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 CRY2Q49AN0 593 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
SSBP1-214ENST00000498107 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 TTLL6Q8N841 843 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
SSBP1-214ENST00000498107 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
SSBP1-214ENST00000498107 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.83
SSBP1-214ENST00000498107 H7C1W4 665 aa20.21■□□□□ 0.83
SSBP1-214ENST00000498107 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
SSBP1-214ENST00000498107 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
SSBP1-214ENST00000498107 GPR162Q16538 588 aa20.21■□□□□ 0.83
SSBP1-214ENST00000498107 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
SSBP1-214ENST00000498107 C9orf78Q9NZ63 289 aaPredicted RBP20.21■□□□□ 0.83
SSBP1-214ENST00000498107 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
SSBP1-214ENST00000498107 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
SSBP1-214ENST00000498107 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
SSBP1-214ENST00000498107 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
SSBP1-214ENST00000498107 BRCA1P38398 1863 aaKnown RBP20.2■□□□□ 0.82
SSBP1-214ENST00000498107 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
SSBP1-214ENST00000498107 LAMB2P55268 1798 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 GRM8O00222 908 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 GRIN3BO60391 1043 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 PDE8AO60658 829 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 MS4A1P11836 297 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
SSBP1-214ENST00000498107 BCS1LQ9Y276 419 aa20.19■□□□□ 0.82
SSBP1-214ENST00000498107 COL11A2P13942 1736 aaPredicted RBP20.19■□□□□ 0.82
SSBP1-214ENST00000498107 TRIM27P14373 513 aa20.18■□□□□ 0.82
SSBP1-214ENST00000498107 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
SSBP1-214ENST00000498107 DDX60Q8IY21 1712 aaKnown RBP20.18■□□□□ 0.82
SSBP1-214ENST00000498107 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
SSBP1-214ENST00000498107 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
SSBP1-214ENST00000498107 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
SSBP1-214ENST00000498107 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
SSBP1-214ENST00000498107 ABCC4O15439 1325 aa20.17■□□□□ 0.82
SSBP1-214ENST00000498107 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
SSBP1-214ENST00000498107 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
SSBP1-214ENST00000498107 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
SSBP1-214ENST00000498107 HDAC5Q9UQL6 1122 aa20.16■□□□□ 0.82
SSBP1-214ENST00000498107 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
SSBP1-214ENST00000498107 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
SSBP1-214ENST00000498107 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
SSBP1-214ENST00000498107 ARFGEF1Q9Y6D6 1849 aa20.15■□□□□ 0.82
SSBP1-214ENST00000498107 MYH3P11055 1940 aa20.14■□□□□ 0.81
SSBP1-214ENST00000498107 UTYO14607 1347 aa20.14■□□□□ 0.81
SSBP1-214ENST00000498107 CASP7P55210 303 aa20.14■□□□□ 0.81
SSBP1-214ENST00000498107 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms