RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CLUL1Q15846 466 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 TXNRD3Q86VQ6 643 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 GAS2L1Q99501 681 aaPredicted RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 SYT17Q9BSW7 474 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 PACSIN1Q9BY11 444 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 TMEM39AQ9NV64 488 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 PTTG2Q9NZH5 202 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 MSH6P52701 1360 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 FIGNL2A6NMB9 653 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 FNBP4Q8N3X1 1017 aaPredicted RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 NLRP7Q8WX94 980 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 MTRQ99707 1265 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 TMX4Q9H1E5 349 aaPredicted RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 KDM5AP29375 1690 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 DDX11L8A8MPP1 907 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 F6X3S4 739 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 F8W810 466 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SUPT5HO00267 1087 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 EXOC5O00471 708 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ATP9BO43861 1147 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 KATNA1O75449 491 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 RAB36O95755 333 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 FAPQ12884 760 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ZNF697Q5TEC3 545 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CLEC4GQ6UXB4 293 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ZBTB49Q6ZSB9 765 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SIRT2Q8IXJ6 389 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 GDF3Q9NR23 364 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CBLCQ9ULV8 474 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 RAD54L2Q9Y4B4 1467 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CDC25AP30304 524 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CDK9P50750 372 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 WNT7BP56706 349 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ERICH3Q5RHP9 1530 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SLC7A3Q8WY07 619 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ART4Q93070 314 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PGBD4Q96DM1 585 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 GPAMQ9HCL2 828 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 GPCPD1Q9NPB8 672 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 HOOK1Q9UJC3 728 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 PCDHA7Q9UN72 937 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PCDHA1Q9Y5I3 950 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ZC3H4Q9UPT8 1303 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 HTATSF1O43719 755 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 CAPN2P17655 700 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PLCB2Q00722 1185 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 MSS51Q4VC12 460 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 MPZL3Q6UWV2 235 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SYNE3Q6ZMZ3 975 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 NPAS3Q8IXF0 933 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PALM2Q8IXS6 379 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 REXO1Q8N1G1 1221 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 HELBQ8NG08 1087 aaPredicted RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 TRIM63Q969Q1 353 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 BEGAINQ9BUH8 593 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SLAMF7Q9NQ25 335 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 WBP1LQ9NX94 342 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 ADGBQ8N7X0 1667 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SAMD9LQ8IVG5 1584 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 RCCD1A6NED2 376 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 SRRM3A6NNA2 597 aaPredicted RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 PPM1BO75688 479 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 TSPAN13O95857 204 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PDGFRBP09619 1106 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PKN2Q16513 984 aaKnown RBP1.85□□□□□ -2.11
XRN1-214ENST00000498077 KRT25Q7Z3Z0 450 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 AEBP1Q8IUX7 1158 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 WDR48Q8TAF3 677 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 DCAF11Q8TEB1 546 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 IRF2BPLQ9H1B7 796 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CLIP2Q9UDT6 1046 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 CACNA1AO00555 2505 aa1.85□□□□□ -2.11
XRN1-214ENST00000498077 PREX2Q70Z35 1606 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 THP07101 528 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 JUNDP17535 347 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 AMPHP49418 695 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PRR20EP86478 221 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PRR20CP86479 221 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PRR20DP86480 221 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PRR20BP86481 221 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PRR20AP86496 221 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 MAP3K10Q02779 954 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 DDR1Q08345 913 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 AKNAD1Q5T1N1 836 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 MCTP1Q6DN14 999 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 TMPRSS6Q8IU80 811 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 DCUN1D3Q8IWE4 304 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 BICD2Q8TD16 824 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 STAMBPL1Q96FJ0 436 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 SAMD9Q5K651 1589 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 NLRP1Q9C000 1473 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 VIRMAQ69YN4 1812 aaKnown RBP1.84□□□□□ -2.11
XRN1-214ENST00000498077 WRNQ14191 1432 aaPredicted RBP eCLIP1.84□□□□□ -2.11
XRN1-214ENST00000498077 DNMT1P26358 1616 aaKnown RBP1.84□□□□□ -2.11
XRN1-214ENST00000498077 PHF20L1A8MW92 1017 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 OSBPP22059 807 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 COPS2P61201 443 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 DEFB132Q7Z7B7 95 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 STK11IPQ8N1F8 1099 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 NEDD1Q8NHV4 660 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms