RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 OSBPL3Q9H4L5 887 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-206ENST00000498043 QTRT2Q9H974 415 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-206ENST00000498043 GPTP24298 496 aa21.92■■□□□ 1.1
CHRNA4-206ENST00000498043 TBC1D9Q6ZT07 1266 aa21.92■■□□□ 1.1
CHRNA4-206ENST00000498043 ONECUT3O60422 494 aaPredicted RBP21.92■■□□□ 1.1
CHRNA4-206ENST00000498043 EIF5P55010 431 aaKnown RBP21.92■■□□□ 1.1
CHRNA4-206ENST00000498043 KCNQ4P56696 695 aa21.92■■□□□ 1.1
CHRNA4-206ENST00000498043 MSH5O43196 834 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 CDC45O75419 566 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 SDSP20132 328 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 ERC1Q8IUD2 1116 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 CHMP3Q9Y3E7 222 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 FOXO4P98177 505 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
CHRNA4-206ENST00000498043 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
CHRNA4-206ENST00000498043 G3BP1Q13283 466 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHRNA4-206ENST00000498043 HSP90AB3PQ58FF7 597 aa21.89■■□□□ 1.1
CHRNA4-206ENST00000498043 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.1
CHRNA4-206ENST00000498043 RFX5P48382 616 aaPredicted RBP21.89■■□□□ 1.09
CHRNA4-206ENST00000498043 STAP2Q9UGK3 403 aa21.89■■□□□ 1.09
CHRNA4-206ENST00000498043 BRWD3Q6RI45 1802 aa21.88■■□□□ 1.09
CHRNA4-206ENST00000498043 EP400Q96L91 3159 aa21.88■■□□□ 1.09
CHRNA4-206ENST00000498043 ERVV-1B6SEH8 477 aa21.88■■□□□ 1.09
CHRNA4-206ENST00000498043 TBC1D32Q96NH3 1257 aa21.88■■□□□ 1.09
CHRNA4-206ENST00000498043 SASH1O94885 1247 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 NLRP10Q86W26 655 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 CLASRPQ8N2M8 674 aaKnown RBP21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 FAM89AQ96GI7 184 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 BCORQ6W2J9 1755 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 PTPN12Q05209 780 aaKnown RBP21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 COPRSQ9NQ92 184 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 LY75O60449 1722 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 AOX1Q06278 1338 aa21.87■■□□□ 1.09
CHRNA4-206ENST00000498043 PCCAP05165 728 aaPredicted RBP21.86■■□□□ 1.09
CHRNA4-206ENST00000498043 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
CHRNA4-206ENST00000498043 UBN2Q6ZU65 1347 aa21.85■■□□□ 1.09
CHRNA4-206ENST00000498043 AACSQ86V21 672 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 DDRGK1Q96HY6 314 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 AK9Q5TCS8 1911 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 CAMTA2O94983 1202 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 C22orf23Q9BZE7 217 aa21.84■■□□□ 1.09
CHRNA4-206ENST00000498043 IFIT2P09913 472 aaKnown RBP21.83■■□□□ 1.09
CHRNA4-206ENST00000498043 PI4K2BQ8TCG2 481 aa21.83■■□□□ 1.09
CHRNA4-206ENST00000498043 TAF1LQ8IZX4 1826 aa21.83■■□□□ 1.08
CHRNA4-206ENST00000498043 MYH3P11055 1940 aa21.83■■□□□ 1.08
CHRNA4-206ENST00000498043 TRIM6-TRIM34B2RNG4 842 aa21.83■■□□□ 1.08
CHRNA4-206ENST00000498043 CCNL1Q9UK58 526 aaPredicted RBP21.83■■□□□ 1.08
CHRNA4-206ENST00000498043 CNTNAP4Q9C0A0 1308 aa21.82■■□□□ 1.08
CHRNA4-206ENST00000498043 ZNF34Q8IZ26 560 aa21.82■■□□□ 1.08
CHRNA4-206ENST00000498043 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
CHRNA4-206ENST00000498043 CASC1Q6TDU7 716 aa21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 RILPL2Q969X0 211 aa21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 CDHR2Q9BYE9 1310 aa21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 SCN7AQ01118 1682 aa21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 CCDC85AQ96PX6 553 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-206ENST00000498043 MAP4K4O95819 1239 aaPredicted RBP21.8■■□□□ 1.08
CHRNA4-206ENST00000498043 TLR7Q9NYK1 1049 aaKnown RBP21.8■■□□□ 1.08
CHRNA4-206ENST00000498043 TTC41PQ6P2S7 1318 aa21.8■■□□□ 1.08
CHRNA4-206ENST00000498043 TFCP2Q12800 502 aa21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 GPATCH3Q96I76 525 aa21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 ZNF594Q96JF6 807 aaPredicted RBP21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 CCDC8Q9H0W5 538 aaPredicted RBP21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 SMIM5Q71RC9 77 aa21.79■■□□□ 1.08
CHRNA4-206ENST00000498043 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 KRT27Q7Z3Y8 459 aa21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 ECHDC1Q9NTX5 307 aa21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 C4BP0C0L5 1744 aa21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 IRS4O14654 1257 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 BCL11BQ9C0K0 894 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-206ENST00000498043 CCDC57Q2TAC2 916 aa21.77■■□□□ 1.08
CHRNA4-206ENST00000498043 ERC2O15083 957 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 GNPATO15228 680 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 GLRX3O76003 335 aaKnown RBP21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 SUSD4Q5VX71 490 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 NIP7Q9Y221 180 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 CTSWP56202 376 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 TNNI3KQ59H18 835 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 ZNF772Q68DY9 489 aaPredicted RBP21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 ATG9AQ7Z3C6 839 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 ZNF652Q9Y2D9 606 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 FPGT-TNNI3KV9GXZ4 949 aa21.76■■□□□ 1.07
CHRNA4-206ENST00000498043 DDX60Q8IY21 1712 aaKnown RBP21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 LRRC24Q50LG9 513 aa21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 LAMB2P55268 1798 aa21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 CSF1RP07333 972 aa21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
CHRNA4-206ENST00000498043 EYA2O00167 538 aa21.74■■□□□ 1.07
CHRNA4-206ENST00000498043 RBM25P49756 843 aaKnown RBP21.74■■□□□ 1.07
CHRNA4-206ENST00000498043 TTLL11Q8NHH1 800 aa21.74■■□□□ 1.07
CHRNA4-206ENST00000498043 GREM2Q9H772 168 aa21.74■■□□□ 1.07
CHRNA4-206ENST00000498043 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
CHRNA4-206ENST00000498043 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms