RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
BRPF1-208ENST00000497565 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
BRPF1-208ENST00000497565 UBN2Q6ZU65 1347 aa16.9■□□□□ 0.3
BRPF1-208ENST00000497565 NTSR2O95665 410 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRPF1-208ENST00000497565 TCIRG1Q13488 830 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 XAGE3Q8WTP9 111 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
BRPF1-208ENST00000497565 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
BRPF1-208ENST00000497565 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
BRPF1-208ENST00000497565 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
BRPF1-208ENST00000497565 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
BRPF1-208ENST00000497565 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
BRPF1-208ENST00000497565 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
BRPF1-208ENST00000497565 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
BRPF1-208ENST00000497565 ANP32CO43423 234 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 AIMP1Q12904 312 aaKnown RBP16.87■□□□□ 0.29
BRPF1-208ENST00000497565 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 PSMD1Q99460 953 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 ABCC12Q96J65 1359 aa16.87■□□□□ 0.29
BRPF1-208ENST00000497565 ANXA1P04083 346 aa16.86■□□□□ 0.29
BRPF1-208ENST00000497565 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
BRPF1-208ENST00000497565 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
BRPF1-208ENST00000497565 CHPF2Q9P2E5 772 aa16.86■□□□□ 0.29
BRPF1-208ENST00000497565 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
BRPF1-208ENST00000497565 KRT24Q2M2I5 525 aa16.85■□□□□ 0.29
BRPF1-208ENST00000497565 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
BRPF1-208ENST00000497565 VPS33BQ9H267 617 aa16.84■□□□□ 0.29
BRPF1-208ENST00000497565 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
BRPF1-208ENST00000497565 IQCA1LA6NCM1 817 aa16.83■□□□□ 0.28
BRPF1-208ENST00000497565 BBOX1O75936 387 aa16.83■□□□□ 0.28
BRPF1-208ENST00000497565 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
BRPF1-208ENST00000497565 TRIM28Q13263 835 aaKnown RBP16.83■□□□□ 0.28
BRPF1-208ENST00000497565 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
BRPF1-208ENST00000497565 TRMT112Q9UI30 125 aaKnown RBP16.83■□□□□ 0.28
BRPF1-208ENST00000497565 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
BRPF1-208ENST00000497565 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
BRPF1-208ENST00000497565 L3MBTL3Q96JM7 780 aaPredicted RBP16.82■□□□□ 0.28
BRPF1-208ENST00000497565 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
BRPF1-208ENST00000497565 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
BRPF1-208ENST00000497565 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
BRPF1-208ENST00000497565 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
BRPF1-208ENST00000497565 GOLGA2Q08379 1002 aa16.81■□□□□ 0.28
BRPF1-208ENST00000497565 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
BRPF1-208ENST00000497565 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
BRPF1-208ENST00000497565 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
BRPF1-208ENST00000497565 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
BRPF1-208ENST00000497565 IL16Q14005 1332 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 POTECB2RU33 542 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 FZD9O00144 591 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
BRPF1-208ENST00000497565 SUPT20HQ8NEM7 779 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
BRPF1-208ENST00000497565 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
BRPF1-208ENST00000497565 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
BRPF1-208ENST00000497565 RIC3Q7Z5B4 369 aa16.79■□□□□ 0.28
BRPF1-208ENST00000497565 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
BRPF1-208ENST00000497565 WWC1Q8IX03 1113 aa16.78■□□□□ 0.28
BRPF1-208ENST00000497565 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
BRPF1-208ENST00000497565 ANKRD36CQ5JPF3 1778 aa16.78■□□□□ 0.28
BRPF1-208ENST00000497565 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
BRPF1-208ENST00000497565 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
BRPF1-208ENST00000497565 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
BRPF1-208ENST00000497565 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
BRPF1-208ENST00000497565 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
BRPF1-208ENST00000497565 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
BRPF1-208ENST00000497565 GPC2Q8N158 579 aa16.77■□□□□ 0.28
BRPF1-208ENST00000497565 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
BRPF1-208ENST00000497565 ABCC4O15439 1325 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
BRPF1-208ENST00000497565 GRAPQ13588 217 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 PNMA8AQ86V59 439 aaPredicted RBP16.76■□□□□ 0.27
BRPF1-208ENST00000497565 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
BRPF1-208ENST00000497565 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
BRPF1-208ENST00000497565 RTFDC1Q9BY42 306 aaPredicted RBP16.76■□□□□ 0.27
BRPF1-208ENST00000497565 SCN4AP35499 1836 aa16.75■□□□□ 0.27
BRPF1-208ENST00000497565 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
BRPF1-208ENST00000497565 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
BRPF1-208ENST00000497565 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
BRPF1-208ENST00000497565 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
BRPF1-208ENST00000497565 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
BRPF1-208ENST00000497565 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
BRPF1-208ENST00000497565 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
BRPF1-208ENST00000497565 DPP8Q6V1X1 898 aaPredicted RBP16.73■□□□□ 0.27
BRPF1-208ENST00000497565 NIM1KQ8IY84 436 aa16.73■□□□□ 0.27
BRPF1-208ENST00000497565 MPNDQ8N594 471 aa16.73■□□□□ 0.27
BRPF1-208ENST00000497565 PHAXQ9H814 394 aaKnown RBP16.73■□□□□ 0.27
BRPF1-208ENST00000497565 ZNF541Q9H0D2 1346 aa16.72■□□□□ 0.27
BRPF1-208ENST00000497565 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
BRPF1-208ENST00000497565 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
BRPF1-208ENST00000497565 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms