RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 PARP3Q9Y6F1 533 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
VPS26A-209ENST00000497564 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-209ENST00000497564 NFIXQ14938 502 aa17.84■□□□□ 0.45
VPS26A-209ENST00000497564 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
VPS26A-209ENST00000497564 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-209ENST00000497564 YY1P25490 414 aa17.83■□□□□ 0.44
VPS26A-209ENST00000497564 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
VPS26A-209ENST00000497564 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
VPS26A-209ENST00000497564 GNAI3P08754 354 aa17.82■□□□□ 0.44
VPS26A-209ENST00000497564 TTLL7Q6ZT98 887 aa17.82■□□□□ 0.44
VPS26A-209ENST00000497564 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
VPS26A-209ENST00000497564 MEIS3Q99687 375 aa17.82■□□□□ 0.44
VPS26A-209ENST00000497564 A0A0G2JLW4 131 aa17.81■□□□□ 0.44
VPS26A-209ENST00000497564 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
VPS26A-209ENST00000497564 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
VPS26A-209ENST00000497564 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
VPS26A-209ENST00000497564 A0A087WZG4 1122 aa17.8■□□□□ 0.44
VPS26A-209ENST00000497564 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
VPS26A-209ENST00000497564 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
VPS26A-209ENST00000497564 MYH3P11055 1940 aa17.8■□□□□ 0.44
VPS26A-209ENST00000497564 UTYO14607 1347 aa17.79■□□□□ 0.44
VPS26A-209ENST00000497564 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
VPS26A-209ENST00000497564 DPEP1P16444 411 aa17.79■□□□□ 0.44
VPS26A-209ENST00000497564 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
VPS26A-209ENST00000497564 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
VPS26A-209ENST00000497564 RWDD1Q9H446 243 aaPredicted RBP17.79■□□□□ 0.44
VPS26A-209ENST00000497564 CHD4Q14839 1912 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 GNAI2P04899 355 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
VPS26A-209ENST00000497564 RPAP2Q8IXW5 612 aaPredicted RBP17.78■□□□□ 0.44
VPS26A-209ENST00000497564 MYD88Q99836 296 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
VPS26A-209ENST00000497564 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
VPS26A-209ENST00000497564 IGHDP01880 384 aa17.77■□□□□ 0.44
VPS26A-209ENST00000497564 KCNA3P22001 575 aa17.77■□□□□ 0.44
VPS26A-209ENST00000497564 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
VPS26A-209ENST00000497564 SERPINB2P05120 415 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 UBTFL1P0CB47 393 aaPredicted RBP17.76■□□□□ 0.43
VPS26A-209ENST00000497564 CHRNA5P30532 468 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 TGFB2P61812 414 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 CWF19L2Q2TBE0 894 aaKnown RBP17.76■□□□□ 0.43
VPS26A-209ENST00000497564 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 LAMB2P55268 1798 aa17.76■□□□□ 0.43
VPS26A-209ENST00000497564 GRM8O00222 908 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 RGL2O15211 777 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
VPS26A-209ENST00000497564 GCKRQ14397 625 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 CEP85Q6P2H3 762 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 GIGYF2Q6Y7W6 1299 aaKnown RBP17.75■□□□□ 0.43
VPS26A-209ENST00000497564 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
VPS26A-209ENST00000497564 SIRT2Q8IXJ6 389 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 CCDC24Q8N4L8 307 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
VPS26A-209ENST00000497564 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
VPS26A-209ENST00000497564 GRIN3BO60391 1043 aa17.74■□□□□ 0.43
VPS26A-209ENST00000497564 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
VPS26A-209ENST00000497564 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-209ENST00000497564 NBPF7P0C2Y1 421 aaPredicted RBP17.73■□□□□ 0.43
VPS26A-209ENST00000497564 HLFQ16534 295 aa17.73■□□□□ 0.43
VPS26A-209ENST00000497564 SMC5Q8IY18 1101 aa17.73■□□□□ 0.43
VPS26A-209ENST00000497564 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
VPS26A-209ENST00000497564 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
VPS26A-209ENST00000497564 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-209ENST00000497564 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
VPS26A-209ENST00000497564 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
VPS26A-209ENST00000497564 PRR5LQ6MZQ0 368 aa17.71■□□□□ 0.43
VPS26A-209ENST00000497564 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 HMMRO75330 724 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 CASP7P55210 303 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 MTX1Q13505 466 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
VPS26A-209ENST00000497564 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
VPS26A-209ENST00000497564 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
VPS26A-209ENST00000497564 H7C1W4 665 aa17.69■□□□□ 0.42
VPS26A-209ENST00000497564 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
VPS26A-209ENST00000497564 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
VPS26A-209ENST00000497564 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
VPS26A-209ENST00000497564 PIM2Q9P1W9 311 aa17.68■□□□□ 0.42
VPS26A-209ENST00000497564 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
VPS26A-209ENST00000497564 C2CD5Q86YS7 1000 aa17.67■□□□□ 0.42
VPS26A-209ENST00000497564 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
VPS26A-209ENST00000497564 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
VPS26A-209ENST00000497564 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
VPS26A-209ENST00000497564 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
VPS26A-209ENST00000497564 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
VPS26A-209ENST00000497564 FAM177BA6PVY3 158 aa17.66■□□□□ 0.42
VPS26A-209ENST00000497564 POLA2Q14181 598 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms