RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CFAP70Q5T0N1 1121 aa7.7□□□□□ -1.18
CBX3-208ENST00000497498 IER5Q5VY09 327 aa7.7□□□□□ -1.18
CBX3-208ENST00000497498 STARD13Q9Y3M8 1113 aa7.7□□□□□ -1.18
CBX3-208ENST00000497498 ADAM23O75077 832 aa7.69□□□□□ -1.18
CBX3-208ENST00000497498 RTN1Q16799 776 aa7.69□□□□□ -1.18
CBX3-208ENST00000497498 CD163Q86VB7 1156 aa7.69□□□□□ -1.18
CBX3-208ENST00000497498 PLVAPQ9BX97 442 aa7.69□□□□□ -1.18
CBX3-208ENST00000497498 PRDM6Q9NQX0 595 aa7.69□□□□□ -1.18
CBX3-208ENST00000497498 C1QTNF9BB2RNN3 333 aa7.68□□□□□ -1.18
CBX3-208ENST00000497498 BAG6P46379 1132 aa7.68□□□□□ -1.18
CBX3-208ENST00000497498 COL9A3Q14050 684 aaPredicted RBP7.68□□□□□ -1.18
CBX3-208ENST00000497498 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
CBX3-208ENST00000497498 NGLY1Q96IV0 654 aa7.68□□□□□ -1.18
CBX3-208ENST00000497498 DMGDHQ9UI17 866 aaKnown RBP7.68□□□□□ -1.18
CBX3-208ENST00000497498 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
CBX3-208ENST00000497498 TGFBR3LH3BV60 316 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 LGR5O75473 907 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 WEE1P30291 646 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 ADH7P40394 386 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 BCS1LQ9Y276 419 aa7.67□□□□□ -1.18
CBX3-208ENST00000497498 M0R082 166 aa7.66□□□□□ -1.18
CBX3-208ENST00000497498 SPATA31C1P0DKV0 1188 aa7.66□□□□□ -1.18
CBX3-208ENST00000497498 CHRNA4P43681 627 aa7.66□□□□□ -1.18
CBX3-208ENST00000497498 MICALL1Q8N3F8 863 aa7.66□□□□□ -1.18
CBX3-208ENST00000497498 ZNF417Q8TAU3 575 aa7.66□□□□□ -1.18
CBX3-208ENST00000497498 ZNF587Q96SQ5 575 aaPredicted RBP7.66□□□□□ -1.18
CBX3-208ENST00000497498 ALBP02768 609 aa7.65□□□□□ -1.18
CBX3-208ENST00000497498 C20orf204Q6ZNR8 217 aa7.65□□□□□ -1.18
CBX3-208ENST00000497498 BHMTQ93088 406 aa7.65□□□□□ -1.18
CBX3-208ENST00000497498 GSX2Q9BZM3 304 aa7.65□□□□□ -1.18
CBX3-208ENST00000497498 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
CBX3-208ENST00000497498 FOXO3O43524 673 aa7.64□□□□□ -1.19
CBX3-208ENST00000497498 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
CBX3-208ENST00000497498 NID1P14543 1247 aa7.63□□□□□ -1.19
CBX3-208ENST00000497498 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
CBX3-208ENST00000497498 QTRT2Q9H974 415 aaKnown RBP7.63□□□□□ -1.19
CBX3-208ENST00000497498 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
CBX3-208ENST00000497498 INPP5BP32019 993 aa7.62□□□□□ -1.19
CBX3-208ENST00000497498 CCINQ13939 588 aa7.62□□□□□ -1.19
CBX3-208ENST00000497498 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
CBX3-208ENST00000497498 MYO19Q96H55 970 aa7.62□□□□□ -1.19
CBX3-208ENST00000497498 KLK14Q9P0G3 267 aa7.62□□□□□ -1.19
CBX3-208ENST00000497498 FURINP09958 794 aa7.61□□□□□ -1.19
CBX3-208ENST00000497498 DGKZQ13574 1117 aa7.61□□□□□ -1.19
CBX3-208ENST00000497498 PRRT3Q5FWE3 981 aa7.61□□□□□ -1.19
CBX3-208ENST00000497498 UBE2OQ9C0C9 1292 aaKnown RBP7.61□□□□□ -1.19
CBX3-208ENST00000497498 C11orf16Q9NQ32 467 aa7.61□□□□□ -1.19
CBX3-208ENST00000497498 SLC6A14Q9UN76 642 aa7.61□□□□□ -1.19
CBX3-208ENST00000497498 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.61□□□□□ -1.19
CBX3-208ENST00000497498 EPB42P16452 691 aa7.6□□□□□ -1.19
CBX3-208ENST00000497498 RFX1P22670 979 aa7.6□□□□□ -1.19
CBX3-208ENST00000497498 IDH3AP50213 366 aa7.6□□□□□ -1.19
CBX3-208ENST00000497498 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
CBX3-208ENST00000497498 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
CBX3-208ENST00000497498 LILRB5O75023 590 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 ELOAQ14241 798 aaKnown RBP7.59□□□□□ -1.19
CBX3-208ENST00000497498 SWI5Q1ZZU3 235 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 C11orf91Q3C1V1 193 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 VTI1AQ96AJ9 217 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
CBX3-208ENST00000497498 DNAJB12Q9NXW2 375 aaKnown RBP7.59□□□□□ -1.19
CBX3-208ENST00000497498 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
CBX3-208ENST00000497498 MICAL2O94851 1124 aa7.58□□□□□ -1.2
CBX3-208ENST00000497498 NFKB1P19838 968 aa7.58□□□□□ -1.2
CBX3-208ENST00000497498 GATA4P43694 442 aa7.58□□□□□ -1.2
CBX3-208ENST00000497498 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
CBX3-208ENST00000497498 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
CBX3-208ENST00000497498 IGFLR1Q9H665 355 aa7.58□□□□□ -1.2
CBX3-208ENST00000497498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.58□□□□□ -1.27e-6■■■■■ 74.5
CBX3-208ENST00000497498 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
CBX3-208ENST00000497498 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 ARSDP51689 593 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 TBC1D8BQ0IIM8 1120 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 FAM69CQ0P6D2 419 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 ILDR2Q71H61 639 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 NAGPAQ9UK23 515 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
CBX3-208ENST00000497498 OPLAHO14841 1288 aa7.56□□□□□ -1.2
CBX3-208ENST00000497498 FKBP5Q13451 457 aaPredicted RBP7.56□□□□□ -1.2
CBX3-208ENST00000497498 PCSK7Q16549 785 aa7.56□□□□□ -1.2
CBX3-208ENST00000497498 OCLNQ16625 522 aa7.56□□□□□ -1.2
CBX3-208ENST00000497498 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
CBX3-208ENST00000497498 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
CBX3-208ENST00000497498 ZFATQ9P243 1243 aa7.56□□□□□ -1.2
CBX3-208ENST00000497498 APBA3O96018 575 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
CBX3-208ENST00000497498 DOC2BQ14184 412 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 TRAPPC3LQ5T215 181 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 PSAPL1Q6NUJ1 521 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 TRPM4Q8TD43 1214 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
CBX3-208ENST00000497498 EGFRP00533 1210 aa7.54□□□□□ -1.2
CBX3-208ENST00000497498 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
CBX3-208ENST00000497498 GRIK4Q16099 956 aa7.54□□□□□ -1.2
CBX3-208ENST00000497498 COX20Q5RI15 118 aa7.54□□□□□ -1.2
CBX3-208ENST00000497498 NUDT8Q8WV74 236 aa7.54□□□□□ -1.2
CBX3-208ENST00000497498 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
CBX3-208ENST00000497498 RTCBQ9Y3I0 505 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms