RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 H7C1W4 665 aa24.89■■□□□ 1.58
SCAMP3-209ENST00000497470 MSH5O43196 834 aa24.89■■□□□ 1.58
SCAMP3-209ENST00000497470 PANK1Q8TE04 598 aa24.89■■□□□ 1.58
SCAMP3-209ENST00000497470 UBN2Q6ZU65 1347 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 CDHR2Q9BYE9 1310 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 RIC1Q4ADV7 1423 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 GRM8O00222 908 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 ZBTB7BO15156 539 aaPredicted RBP24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 TPTE2Q6XPS3 522 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 USP44Q9H0E7 712 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 TNNQ9UQP3 1299 aa24.88■■□□□ 1.57
SCAMP3-209ENST00000497470 ATP5J2-PTCD1G3V325 749 aa24.87■■□□□ 1.57
SCAMP3-209ENST00000497470 CWF19L2Q2TBE0 894 aaKnown RBP24.87■■□□□ 1.57
SCAMP3-209ENST00000497470 SLC10A5Q5PT55 438 aa24.87■■□□□ 1.57
SCAMP3-209ENST00000497470 ERICH6BQ5W0A0 696 aa24.87■■□□□ 1.57
SCAMP3-209ENST00000497470 UTP14AQ9BVJ6 771 aaKnown RBP24.87■■□□□ 1.57
SCAMP3-209ENST00000497470 NTSR2O95665 410 aa24.86■■□□□ 1.57
SCAMP3-209ENST00000497470 C20orf194Q5TEA3 1177 aa24.86■■□□□ 1.57
SCAMP3-209ENST00000497470 ITPRIPQ8IWB1 547 aa24.86■■□□□ 1.57
SCAMP3-209ENST00000497470 PLA2G12BQ9BX93 195 aa24.86■■□□□ 1.57
SCAMP3-209ENST00000497470 C9orf78Q9NZ63 289 aaPredicted RBP24.86■■□□□ 1.57
SCAMP3-209ENST00000497470 POLRMTO00411 1230 aaKnown RBP24.85■■□□□ 1.57
SCAMP3-209ENST00000497470 CASP7P55210 303 aa24.85■■□□□ 1.57
SCAMP3-209ENST00000497470 SUSD4Q5VX71 490 aa24.85■■□□□ 1.57
SCAMP3-209ENST00000497470 SH3TC1Q8TE82 1336 aa24.85■■□□□ 1.57
SCAMP3-209ENST00000497470 NRXN2Q9P2S2 1712 aa24.84■■□□□ 1.57
SCAMP3-209ENST00000497470 GPTP24298 496 aa24.84■■□□□ 1.57
SCAMP3-209ENST00000497470 COG6Q9Y2V7 657 aa24.84■■□□□ 1.57
SCAMP3-209ENST00000497470 ZBTB40Q9NUA8 1239 aa24.83■■□□□ 1.57
SCAMP3-209ENST00000497470 TRMT112Q9UI30 125 aaKnown RBP24.83■■□□□ 1.57
SCAMP3-209ENST00000497470 PARP3Q9Y6F1 533 aa24.83■■□□□ 1.57
SCAMP3-209ENST00000497470 AFDNP55196 1824 aaKnown RBP24.82■■□□□ 1.56
SCAMP3-209ENST00000497470 SERPINB2P05120 415 aa24.82■■□□□ 1.56
SCAMP3-209ENST00000497470 NBPF5PQ86XG9 351 aaPredicted RBP24.82■■□□□ 1.56
SCAMP3-209ENST00000497470 NEFLP07196 543 aa24.81■■□□□ 1.56
SCAMP3-209ENST00000497470 MMP10P09238 476 aa24.81■■□□□ 1.56
SCAMP3-209ENST00000497470 UBTFL1P0CB47 393 aaPredicted RBP24.81■■□□□ 1.56
SCAMP3-209ENST00000497470 DDR1Q08345 913 aa24.81■■□□□ 1.56
SCAMP3-209ENST00000497470 PDZRN3Q9UPQ7 1066 aa24.81■■□□□ 1.56
SCAMP3-209ENST00000497470 PDGFDQ9GZP0 370 aaPredicted RBP24.8■■□□□ 1.56
SCAMP3-209ENST00000497470 CNBD1Q8NA66 436 aa24.79■■□□□ 1.56
SCAMP3-209ENST00000497470 MEIS3Q99687 375 aa24.79■■□□□ 1.56
SCAMP3-209ENST00000497470 SGIP1Q9BQI5 828 aa24.79■■□□□ 1.56
SCAMP3-209ENST00000497470 KLRG2A4D1S0 409 aaPredicted RBP24.78■■□□□ 1.56
SCAMP3-209ENST00000497470 GNAI2P04899 355 aa24.78■■□□□ 1.56
SCAMP3-209ENST00000497470 NBPF7P0C2Y1 421 aaPredicted RBP24.78■■□□□ 1.56
SCAMP3-209ENST00000497470 POLD1P28340 1107 aa24.78■■□□□ 1.56
SCAMP3-209ENST00000497470 BICDL1Q6ZP65 573 aa24.78■■□□□ 1.56
SCAMP3-209ENST00000497470 PDE8AO60658 829 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 ST5P78524 1137 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 MTX1Q13505 466 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 PRR5LQ6MZQ0 368 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 UBE3BQ7Z3V4 1068 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 CRBNQ96SW2 442 aa24.77■■□□□ 1.56
SCAMP3-209ENST00000497470 IRS4O14654 1257 aaPredicted RBP24.76■■□□□ 1.55
SCAMP3-209ENST00000497470 GTF2E1P29083 439 aaPredicted RBP24.76■■□□□ 1.55
SCAMP3-209ENST00000497470 RABL6Q3YEC7 729 aaPredicted RBP24.76■■□□□ 1.55
SCAMP3-209ENST00000497470 FAM89AQ96GI7 184 aa24.76■■□□□ 1.55
SCAMP3-209ENST00000497470 RPAP2Q8IXW5 612 aaPredicted RBP24.75■■□□□ 1.55
SCAMP3-209ENST00000497470 BRIP1Q9BX63 1249 aa24.75■■□□□ 1.55
SCAMP3-209ENST00000497470 SPON1Q9HCB6 807 aa24.75■■□□□ 1.55
SCAMP3-209ENST00000497470 PSDA5PKW4 1024 aaPredicted RBP24.74■■□□□ 1.55
SCAMP3-209ENST00000497470 CSF1RP07333 972 aa24.74■■□□□ 1.55
SCAMP3-209ENST00000497470 SF3B3Q15393 1217 aaKnown RBP24.74■■□□□ 1.55
SCAMP3-209ENST00000497470 RTL9Q8NET4 1388 aa24.74■■□□□ 1.55
SCAMP3-209ENST00000497470 LAMB2P55268 1798 aa24.74■■□□□ 1.55
SCAMP3-209ENST00000497470 MSL1Q68DK7 614 aa24.73■■□□□ 1.55
SCAMP3-209ENST00000497470 ZBTB7AO95365 584 aa24.72■■□□□ 1.55
SCAMP3-209ENST00000497470 PTGER2P43116 358 aa24.72■■□□□ 1.55
SCAMP3-209ENST00000497470 ERFEQ4G0M1 354 aa24.72■■□□□ 1.55
SCAMP3-209ENST00000497470 KAZALD1Q96I82 304 aa24.72■■□□□ 1.55
SCAMP3-209ENST00000497470 NLRP3Q96P20 1036 aa24.72■■□□□ 1.55
SCAMP3-209ENST00000497470 PDE6BP35913 854 aa24.71■■□□□ 1.55
SCAMP3-209ENST00000497470 FOXO4P98177 505 aa24.71■■□□□ 1.55
SCAMP3-209ENST00000497470 CRY2Q49AN0 593 aa24.71■■□□□ 1.55
SCAMP3-209ENST00000497470 SUCLG2Q96I99 432 aa24.71■■□□□ 1.55
SCAMP3-209ENST00000497470 NPHP1O15259 732 aa24.7■■□□□ 1.54
SCAMP3-209ENST00000497470 CTSWP56202 376 aa24.7■■□□□ 1.54
SCAMP3-209ENST00000497470 EXOC6Q8TAG9 804 aa24.7■■□□□ 1.54
SCAMP3-209ENST00000497470 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
SCAMP3-209ENST00000497470 NUTM1Q86Y26 1132 aa24.69■■□□□ 1.54
SCAMP3-209ENST00000497470 LRRFIP2Q9Y608 721 aaKnown RBP24.69■■□□□ 1.54
SCAMP3-209ENST00000497470 ABCC12Q96J65 1359 aa24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 ATP8B2P98198 1209 aa24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 CCDC152Q4G0S7 254 aa24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 TTLL11Q8NHH1 800 aa24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 CD2APQ9Y5K6 639 aa24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 DDX60Q8IY21 1712 aaKnown RBP24.68■■□□□ 1.54
SCAMP3-209ENST00000497470 SYNE4Q8N205 404 aa24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 ANKRD44Q8N8A2 993 aa24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 BICC1Q9H694 974 aaKnown RBP24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 FBXO3Q9UK99 471 aa24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 ATF5Q9Y2D1 282 aaPredicted RBP24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 KIF13BQ9NQT8 1826 aa24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 MYH3P11055 1940 aa24.67■■□□□ 1.54
SCAMP3-209ENST00000497470 FAM177BA6PVY3 158 aa24.66■■□□□ 1.54
SCAMP3-209ENST00000497470 HOXA10P31260 410 aaPredicted RBP24.66■■□□□ 1.54
SCAMP3-209ENST00000497470 TGFB2P61812 414 aa24.66■■□□□ 1.54
SCAMP3-209ENST00000497470 HMMRO75330 724 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms