RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 TRPC1P48995 793 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 KLHL10Q6JEL2 608 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 PDILTQ8N807 584 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
VIT-208ENST00000497382 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 POLR3CQ9BUI4 534 aaPredicted RBP11.37□□□□□ -0.59
VIT-208ENST00000497382 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
VIT-208ENST00000497382 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.37□□□□□ -0.59
VIT-208ENST00000497382 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
VIT-208ENST00000497382 KANK1Q14678 1352 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 PIK3R4Q99570 1358 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 KIF5CO60282 957 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 SRPK2P78362 688 aaKnown RBP11.36□□□□□ -0.59
VIT-208ENST00000497382 ZNF394Q53GI3 561 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
VIT-208ENST00000497382 RGS12O14924 1447 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 DCCP43146 1447 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 MCM5P33992 734 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
VIT-208ENST00000497382 UHMK1Q8TAS1 419 aaKnown RBP11.36□□□□□ -0.59
VIT-208ENST00000497382 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
VIT-208ENST00000497382 MYOM3Q5VTT5 1437 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
VIT-208ENST00000497382 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
VIT-208ENST00000497382 HMMRO75330 724 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 PSME1Q06323 249 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 RWDD1Q9H446 243 aaPredicted RBP11.35□□□□□ -0.59
VIT-208ENST00000497382 CHPF2Q9P2E5 772 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
VIT-208ENST00000497382 NOS1P29475 1434 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
VIT-208ENST00000497382 MYBL2P10244 700 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
VIT-208ENST00000497382 SAMD3Q8N6K7 520 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 BLOC1S6Q9UL45 172 aa11.35□□□□□ -0.59
VIT-208ENST00000497382 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 CCDC175P0C221 793 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 SENP7Q9BQF6 1050 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
VIT-208ENST00000497382 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
VIT-208ENST00000497382 A0A1B0GUL7 405 aa11.33□□□□□ -0.59
VIT-208ENST00000497382 VDRP11473 427 aa11.33□□□□□ -0.59
VIT-208ENST00000497382 XBP1P17861 261 aa11.33□□□□□ -0.59
VIT-208ENST00000497382 RWDD2BP57060 319 aa11.33□□□□□ -0.59
VIT-208ENST00000497382 GJC2Q5T442 439 aaPredicted RBP11.33□□□□□ -0.59
VIT-208ENST00000497382 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.59
VIT-208ENST00000497382 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.59
VIT-208ENST00000497382 NOL7Q9UMY1 257 aaKnown RBP11.33□□□□□ -0.59
VIT-208ENST00000497382 AFF2P51816 1311 aa11.33□□□□□ -0.6
VIT-208ENST00000497382 CROCC2H7BZ55 1655 aa11.33□□□□□ -0.6
VIT-208ENST00000497382 CDKL5O76039 1030 aa11.33□□□□□ -0.6
VIT-208ENST00000497382 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.6
VIT-208ENST00000497382 TTC19Q6DKK2 380 aaPredicted RBP11.33□□□□□ -0.6
VIT-208ENST00000497382 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
VIT-208ENST00000497382 ZFYVE9O95405 1425 aa11.33□□□□□ -0.6
VIT-208ENST00000497382 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 ALDH1B1P30837 517 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 ANKRD13BQ86YJ7 626 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 VPS37AQ8NEZ2 397 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 NCAPG2Q86XI2 1143 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 NGLY1Q96IV0 654 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 CEP89Q96ST8 783 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 C19orf44Q9H6X5 657 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 RABL2AQ9UBK7 228 aaPredicted RBP11.32□□□□□ -0.6
VIT-208ENST00000497382 IMPDH2P12268 514 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 IDI1Q13907 227 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
VIT-208ENST00000497382 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
VIT-208ENST00000497382 CARNS1A5YM72 827 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 ARL10Q8N8L6 244 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 SH3GL3Q99963 347 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 ATF3P18847 181 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 TBC1D10BQ4KMP7 808 aaPredicted RBP11.31□□□□□ -0.6
VIT-208ENST00000497382 CCDC146Q8IYE0 955 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
VIT-208ENST00000497382 NEK9Q8TD19 979 aa11.31□□□□□ -0.6
VIT-208ENST00000497382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
VIT-208ENST00000497382 LRP5O75197 1615 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms