RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	IGKV5-2	P06315	115 aa		10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	CT47B1	P0C2W7	299 aa	Predicted RBP	10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	YBX3	P16989	372 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	ST5	P78524	1137 aa		10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	TPTE2	Q6XPS3	522 aa		10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	SYNE4	Q8N205	404 aa		10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282	NPHP1	O15259	732 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	RARS	P54136	660 aa	Known RBP	10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	CWF19L2	Q2TBE0	894 aa	Known RBP	10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	ALDH1L2	Q3SY69	923 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	C3orf67	Q6ZVT6	689 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	PPP1R42	Q7Z4L9	355 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	C2CD5	Q86YS7	1000 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	DNAAF4	Q8WXU2	420 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	UTP14A	Q9BVJ6	771 aa	Known RBP	10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	BRIP1	Q9BX63	1249 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	NYX	Q9GZU5	481 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	SMC4	Q9NTJ3	1288 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	SRCAP	Q6ZRS2	3230 aa		10.28	□□□□□ -0.76
EFNA1-205	ENST00000497282	TRIM28	Q13263	835 aa	Known RBP	10.27	□□□□□ -0.77
EFNA1-205	ENST00000497282	TRMT112	Q9UI30	125 aa	Known RBP	10.27	□□□□□ -0.77
EFNA1-205	ENST00000497282	SLX4	Q8IY92	1834 aa		10.27	□□□□□ -0.77
EFNA1-205	ENST00000497282	RNF123	Q5XPI4	1314 aa		10.27	□□□□□ -0.77
EFNA1-205	ENST00000497282	TAF1	P21675	1872 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	KLRG2	A4D1S0	409 aa	Predicted RBP	10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	NEURL1B	A8MQ27	555 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	SRGN	P10124	158 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	GTF2E1	P29083	439 aa	Predicted RBP	10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	PDE6B	P35913	854 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	CRY2	Q49AN0	593 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	RTL5	Q5HYW3	569 aa	Predicted RBP	10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	PELP1	Q8IZL8	1130 aa	Known RBP	10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	CCDC191	Q8NCU4	936 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	FAM89A	Q96GI7	184 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	YTHDC1	Q96MU7	727 aa	Known RBP	10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	MYH3	P11055	1940 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282	SH3TC1	Q8TE82	1336 aa		10.26	□□□□□ -0.77
EFNA1-205	ENST00000497282		H0YIN7	160 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	HCLS1	P14317	486 aa	Predicted RBP	10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	BRPF1	P55201	1214 aa	Predicted RBP	10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	NEXN	Q0ZGT2	675 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	SLC10A5	Q5PT55	438 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	BEND3	Q5T5X7	828 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	JARID2	Q92833	1246 aa	Predicted RBP	10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	CWC25	Q9NXE8	425 aa	Predicted RBP	10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	PIM2	Q9P1W9	311 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	BCS1L	Q9Y276	419 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	PTPRC	P08575	1304 aa		10.25	□□□□□ -0.77
EFNA1-205	ENST00000497282	LRRC37A	A6NMS7	1700 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	FER1L6	Q2WGJ9	1857 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	BCAR3	O75815	825 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	PCCA	P05165	728 aa	Predicted RBP	10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	GPR162	Q16538	588 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	SLC51A	Q86UW1	340 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	LINS1	Q8NG48	757 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	NOB1	Q9ULX3	412 aa	Known RBP	10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	TNN	Q9UQP3	1299 aa		10.24	□□□□□ -0.77
EFNA1-205	ENST00000497282	SPEF2	Q9C093	1822 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	NPR1	P16066	1061 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	CASP7	P55210	303 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	GCKR	Q14397	625 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	DALRD3	Q5D0E6	543 aa	Known RBP	10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	STYK1	Q6J9G0	422 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	SLC4A10	Q6U841	1118 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	MASTL	Q96GX5	879 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	PDZRN3	Q9UPQ7	1066 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	KIF16B	Q96L93	1317 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	CDHR2	Q9BYE9	1310 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	SNED1	Q8TER0	1413 aa		10.23	□□□□□ -0.77
EFNA1-205	ENST00000497282	IRS4	O14654	1257 aa	Predicted RBP	10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282	PRPF40B	Q6NWY9	871 aa	Known RBP	10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282	UBE3B	Q7Z3V4	1068 aa		10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282	TTLL6	Q8N841	843 aa		10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282	NLRP3	Q96P20	1036 aa		10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282	CHD4	Q14839	1912 aa		10.22	□□□□□ -0.77
EFNA1-205	ENST00000497282		H7C1W4	665 aa		10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	TRIM27	P14373	513 aa		10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	HOXA10	P31260	410 aa	Predicted RBP	10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	RPGR	Q92834	1020 aa	Known RBP	10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	CNKSR1	Q969H4	720 aa		10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	SRCIN1	Q9C0H9	1055 aa		10.21	□□□□□ -0.77
EFNA1-205	ENST00000497282	ABCC4	O15439	1325 aa		10.21	□□□□□ -0.78
EFNA1-205	ENST00000497282	TIAM2	Q8IVF5	1701 aa		10.21	□□□□□ -0.78
EFNA1-205	ENST00000497282	SBF1	O95248	1867 aa		10.21	□□□□□ -0.78
EFNA1-205	ENST00000497282	GRM8	O00222	908 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	PDE8A	O60658	829 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	ALDH1L1	O75891	902 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	LTBP1	Q14766	1721 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	SF3B3	Q15393	1217 aa	Known RBP	10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	OLFM4	Q6UX06	510 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	FRAT1	Q92837	279 aa	Predicted RBP	10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	CRAMP1	Q96RY5	1269 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	DUOX1	Q9NRD9	1551 aa		10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.2	□□□□□ -0.78
EFNA1-205	ENST00000497282	CCDC88A	Q3V6T2	1871 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282		A0A1B0GUL6	1792 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	UTY	O14607	1347 aa		10.19	□□□□□ -0.78
EFNA1-205	ENST00000497282	NFKBIE	O00221	500 aa		10.19	□□□□□ -0.78

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