RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ANKIB1Q9P2G1 1089 aa7.33□□□□□ -1.24
SMC4-225ENST00000497203 LRFN2Q9ULH4 789 aa7.33□□□□□ -1.24
SMC4-225ENST00000497203 BMP4P12644 408 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 SCNN1AP37088 669 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 TYRO3Q06418 890 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 ACDQ96AP0 544 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 CEP63Q96MT8 703 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 SAP130Q9H0E3 1048 aa7.32□□□□□ -1.24
SMC4-225ENST00000497203 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
SMC4-225ENST00000497203 K7ELQ4 463 aaPredicted RBP7.31□□□□□ -1.24
SMC4-225ENST00000497203 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
SMC4-225ENST00000497203 COX20Q5RI15 118 aa7.31□□□□□ -1.24
SMC4-225ENST00000497203 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
SMC4-225ENST00000497203 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
SMC4-225ENST00000497203 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
SMC4-225ENST00000497203 ZBTB7CA1YPR0 619 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 TGFBR3LH3BV60 316 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 MAP2K3P46734 347 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 NAA30Q147X3 362 aaPredicted RBP7.3□□□□□ -1.24
SMC4-225ENST00000497203 HIF1AQ16665 826 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 IER5Q5VY09 327 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 COL26A1Q96A83 441 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMC4-225ENST00000497203 MARK1Q9P0L2 795 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 SEPT3Q9UH03 358 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 USTQ9Y2C2 406 aa7.3□□□□□ -1.24
SMC4-225ENST00000497203 SSFA2P28290 1259 aa7.29□□□□□ -1.24
SMC4-225ENST00000497203 LAMC2Q13753 1193 aa7.29□□□□□ -1.24
SMC4-225ENST00000497203 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
SMC4-225ENST00000497203 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
SMC4-225ENST00000497203 BEND7Q8N7W2 519 aaPredicted RBP7.29□□□□□ -1.24
SMC4-225ENST00000497203 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
SMC4-225ENST00000497203 PTCD1O75127 700 aaKnown RBP7.28□□□□□ -1.24
SMC4-225ENST00000497203 BCRP11274 1271 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 PHLDB3Q6NSJ2 640 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 PODNQ7Z5L7 613 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 LRRC4BQ9NT99 713 aa7.28□□□□□ -1.24
SMC4-225ENST00000497203 TNFRSF10BO14763 440 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 IDH3AP50213 366 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 KCNQ4P56696 695 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
SMC4-225ENST00000497203 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 KCNH4Q9UQ05 1017 aa7.27□□□□□ -1.25
SMC4-225ENST00000497203 MICAL2O94851 1124 aa7.26□□□□□ -1.25
SMC4-225ENST00000497203 ARAFP10398 606 aa7.26□□□□□ -1.25
SMC4-225ENST00000497203 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
SMC4-225ENST00000497203 INPP5BP32019 993 aa7.26□□□□□ -1.25
SMC4-225ENST00000497203 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
SMC4-225ENST00000497203 ETFBKMTQ8IXQ9 262 aa7.26□□□□□ -1.25
SMC4-225ENST00000497203 GGA1Q9UJY5 639 aa7.26□□□□□ -1.25
SMC4-225ENST00000497203 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
SMC4-225ENST00000497203 OIP5O43482 229 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 PCBP4P57723 403 aaKnown RBP7.25□□□□□ -1.25
SMC4-225ENST00000497203 SPEM2Q0P670 501 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 RAB44Q7Z6P3 723 aaPredicted RBP7.25□□□□□ -1.25
SMC4-225ENST00000497203 TREML1Q86YW5 311 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 NEDD1Q8NHV4 660 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 PODXL2Q9NZ53 605 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 GDF2Q9UK05 429 aaPredicted RBP7.25□□□□□ -1.25
SMC4-225ENST00000497203 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
SMC4-225ENST00000497203 NEURL1BA8MQ27 555 aa7.24□□□□□ -1.25
SMC4-225ENST00000497203 OPLAHO14841 1288 aa7.24□□□□□ -1.25
SMC4-225ENST00000497203 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
SMC4-225ENST00000497203 SLCO4C1Q6ZQN7 724 aa7.24□□□□□ -1.25
SMC4-225ENST00000497203 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
SMC4-225ENST00000497203 USP20Q9Y2K6 914 aa7.24□□□□□ -1.25
SMC4-225ENST00000497203 SHISA8B8ZZ34 492 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 BRD2P25440 801 aaKnown RBP7.23□□□□□ -1.25
SMC4-225ENST00000497203 ADH6P28332 368 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 ARSDP51689 593 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 FCHSD1Q86WN1 690 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
SMC4-225ENST00000497203 AVENQ9NQS1 362 aaPredicted RBP7.23□□□□□ -1.25
SMC4-225ENST00000497203 ZBTB39O15060 712 aa7.22□□□□□ -1.25
SMC4-225ENST00000497203 BAG6P46379 1132 aa7.22□□□□□ -1.25
SMC4-225ENST00000497203 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
SMC4-225ENST00000497203 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
SMC4-225ENST00000497203 STIM2Q9P246 746 aa7.22□□□□□ -1.25
SMC4-225ENST00000497203 EPXP11678 715 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 AEBP1Q8IUX7 1158 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 RGL4Q8IZJ4 473 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 BHMTQ93088 406 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
SMC4-225ENST00000497203 RTCBQ9Y3I0 505 aaKnown RBP7.21□□□□□ -1.26
SMC4-225ENST00000497203 KRBA1A5PL33 1030 aa7.2□□□□□ -1.26
SMC4-225ENST00000497203 BRD1O95696 1058 aa7.2□□□□□ -1.26
SMC4-225ENST00000497203 EPB42P16452 691 aa7.2□□□□□ -1.26
SMC4-225ENST00000497203 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
SMC4-225ENST00000497203 ALYREFQ86V81 257 aaKnown RBP7.2□□□□□ -1.26
SMC4-225ENST00000497203 HELQQ8TDG4 1101 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms