RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 SOGA3Q5TF21 947 aa10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 ZNF34Q8IZ26 560 aa10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 UTP14AQ9BVJ6 771 aaKnown RBP10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 SMC4Q9NTJ3 1288 aa10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 BRCA1P38398 1863 aaKnown RBP10.4□□□□□ -0.75
SMARCD3-215ENST00000496530 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.75
SMARCD3-215ENST00000496530 ALDH1B1P30837 517 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 RARSP54136 660 aaKnown RBP10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 STYK1Q6J9G0 422 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 LRP10Q7Z4F1 713 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 SSH1Q8WYL5 1049 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 TMX4Q9H1E5 349 aaPredicted RBP10.39□□□□□ -0.75
SMARCD3-215ENST00000496530 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 CACNA1FO60840 1977 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 CT47B1P0C2W7 299 aaPredicted RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 NPR1P16066 1061 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 KCNA3P22001 575 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 SUSD4Q5VX71 490 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 RPGRQ92834 1020 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 PHAXQ9H814 394 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 TRMT112Q9UI30 125 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 NOB1Q9ULX3 412 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-215ENST00000496530 UBN2Q6ZU65 1347 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 SH3TC1Q8TE82 1336 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 ARFGEF2Q9Y6D5 1785 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 IPO8O15397 1037 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 SRGNP10124 158 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 IRX6P78412 446 aaPredicted RBP10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 NLRP10Q86W26 655 aa10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 RBM17Q96I25 401 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-215ENST00000496530 RIC1Q4ADV7 1423 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 NTSR2O95665 410 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 FKBP5Q13451 457 aaPredicted RBP10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 KSR2Q6VAB6 950 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 MYD88Q99836 296 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 CACNA1SQ13698 1873 aa10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
SMARCD3-215ENST00000496530 NEFLP07196 543 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 FLIIQ13045 1269 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 SLC4A10Q6U841 1118 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 G2E3Q7L622 706 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 CCDC191Q8NCU4 936 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
SMARCD3-215ENST00000496530 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 C21orf2O43822 256 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 TRIM28Q13263 835 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 GRIPAP1Q4V328 841 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 PRPF40BQ6NWY9 871 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 CWC25Q9NXE8 425 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-215ENST00000496530 CRY2Q49AN0 593 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 CCDC93Q567U6 631 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 CC2D2BQ6DHV5 1058 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 RTKN2Q8IZC4 609 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 ZBTB38Q8NAP3 1195 aaPredicted RBP10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 ABCC12Q96J65 1359 aa10.33□□□□□ -0.76
SMARCD3-215ENST00000496530 TNRC6CQ9HCJ0 1690 aaKnown RBP10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 IRS4O14654 1257 aaPredicted RBP10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 MS4A1P11836 297 aa10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 FTSJ3Q8IY81 847 aaKnown RBP10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 DNAAF4Q8WXU2 420 aa10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 FAM89AQ96GI7 184 aa10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 RNF181Q9P0P0 153 aa10.32□□□□□ -0.76
SMARCD3-215ENST00000496530 PCCAP05165 728 aaPredicted RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 HCLS1P14317 486 aaPredicted RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 LMNB1P20700 586 aa10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 RRP1P56182 461 aaKnown RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 C9orf131Q5VYM1 1079 aa10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 TMC4Q7Z404 712 aa10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 API5Q9BZZ5 524 aaKnown RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
SMARCD3-215ENST00000496530 LAMB2P55268 1798 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 F6X3S4 739 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 PPEF1O14829 653 aaPredicted RBP10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 PDE8AO60658 829 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 BBOX1O75936 387 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 CCDC152Q4G0S7 254 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms