RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 TSGA10Q9BZW7 698 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 INPP5BP32019 993 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 AFAP1L2Q8N4X5 818 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPHP1-211ENST00000496524 STRN4Q9NRL3 753 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
NPHP1-211ENST00000496524 ZNF165P49910 485 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 KRBA2Q6ZNG9 492 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 TCP11L1Q9NUJ3 509 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 LUC7L3O95232 432 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 ARL1P40616 181 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 GABPB2Q8TAK5 448 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 SPAG1Q07617 926 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 STX6O43752 255 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 ZEB2O60315 1214 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 DNA2P51530 1060 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 HSP90AA5PQ58FG0 334 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 SDCCAG8Q86SQ7 713 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 ZSCAN16Q9H4T2 348 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 LARSQ9P2J5 1176 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 GABPB1Q06547 395 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 SPATS2Q86XZ4 545 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 PNISRQ8TF01 805 aaKnown RBP9.37□□□□□ -0.91
NPHP1-211ENST00000496524 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 SELENOSQ9BQE4 189 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 HAUS8Q9BT25 410 aa9.37□□□□□ -0.91
NPHP1-211ENST00000496524 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
NPHP1-211ENST00000496524 Q9H521 79 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 UBASH3AP57075 661 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC170Q8IYT3 715 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 GBP5Q96PP8 586 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 RB1CC1Q8TDY2 1594 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 GAS8O95995 478 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 SLC4A8Q2Y0W8 1093 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 BICD1Q96G01 975 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC62Q6P9F0 684 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 LRSAM1Q6UWE0 723 aa9.36□□□□□ -0.91
NPHP1-211ENST00000496524 AKR1B10O60218 316 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 VIMP08670 466 aaKnown RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 RLBP1P12271 317 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 SMG6Q86US8 1419 aaKnown RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 PPFIA1Q13136 1202 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 TAF7Q15545 349 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 RPAP2Q8IXW5 612 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 SPATS2LQ9NUQ6 558 aaKnown RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 ERCC3P19447 782 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 AFAP1L1Q8TED9 768 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC26Q8TAB7 109 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 CSRNP2Q9H175 543 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 CPLX3Q8WVH0 158 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 GCKP35557 465 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 PSME1Q06323 249 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-211ENST00000496524 BMP15O95972 392 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 TNNC1P63316 161 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 DBN1Q16643 649 aa9.35□□□□□ -0.91
NPHP1-211ENST00000496524 BICDL2A1A5D9 508 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 GSTA5Q7RTV2 222 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CCT6BQ92526 530 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 SLC8A1P32418 973 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 TWISTNBQ3B726 338 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-211ENST00000496524 MCUR1Q96AQ8 359 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-211ENST00000496524 DNAI1Q9UI46 699 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 RSPH3Q86UC2 560 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CUL5Q93034 780 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CETN3O15182 167 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CLUL1Q15846 466 aa9.34□□□□□ -0.91
NPHP1-211ENST00000496524 SPTY2D1Q68D10 685 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-211ENST00000496524 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
NPHP1-211ENST00000496524 NDUFAB1O14561 156 aa9.34□□□□□ -0.92
NPHP1-211ENST00000496524 IQCA1Q86XH1 822 aa9.34□□□□□ -0.92
NPHP1-211ENST00000496524 CAPZA3Q96KX2 299 aa9.34□□□□□ -0.92
NPHP1-211ENST00000496524 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 SH3BP5O60239 455 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 GLRX3O76003 335 aaKnown RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 HNRNPMP52272 730 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 MYO1BO43795 1136 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 SKILP12757 684 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 CALCOCO2Q13137 446 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms