RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 ZNF521Q96K83 1311 aa23.6■■□□□ 1.37
COPS6-210ENST00000496358 CNKSR1Q969H4 720 aa23.6■■□□□ 1.37
COPS6-210ENST00000496358 KLRG2A4D1S0 409 aaPredicted RBP23.59■■□□□ 1.37
COPS6-210ENST00000496358 NPR1P16066 1061 aa23.59■■□□□ 1.37
COPS6-210ENST00000496358 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
COPS6-210ENST00000496358 ABCC12Q96J65 1359 aa23.59■■□□□ 1.37
COPS6-210ENST00000496358 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
COPS6-210ENST00000496358 TNRC6CQ9HCJ0 1690 aaKnown RBP23.58■■□□□ 1.37
COPS6-210ENST00000496358 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
COPS6-210ENST00000496358 SLX4Q8IY92 1834 aa23.58■■□□□ 1.37
COPS6-210ENST00000496358 VAMP4O75379 141 aa23.57■■□□□ 1.36
COPS6-210ENST00000496358 ZNF219Q9P2Y4 722 aaPredicted RBP23.57■■□□□ 1.36
COPS6-210ENST00000496358 TRMT112Q9UI30 125 aaKnown RBP23.57■■□□□ 1.36
COPS6-210ENST00000496358 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
COPS6-210ENST00000496358 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
COPS6-210ENST00000496358 RIC1Q4ADV7 1423 aa23.56■■□□□ 1.36
COPS6-210ENST00000496358 RNF123Q5XPI4 1314 aa23.56■■□□□ 1.36
COPS6-210ENST00000496358 C21orf2O43822 256 aa23.55■■□□□ 1.36
COPS6-210ENST00000496358 PRPF40BQ6NWY9 871 aaKnown RBP23.55■■□□□ 1.36
COPS6-210ENST00000496358 ISCA1Q9BUE6 129 aa23.55■■□□□ 1.36
COPS6-210ENST00000496358 SBF1O95248 1867 aa23.54■■□□□ 1.36
COPS6-210ENST00000496358 ALDH1B1P30837 517 aa23.54■■□□□ 1.36
COPS6-210ENST00000496358 ZNF428Q96B54 188 aa23.54■■□□□ 1.36
COPS6-210ENST00000496358 NLRP3Q96P20 1036 aa23.54■■□□□ 1.36
COPS6-210ENST00000496358 E9PSI1 815 aa23.53■■□□□ 1.36
COPS6-210ENST00000496358 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
COPS6-210ENST00000496358 SLC10A5Q5PT55 438 aa23.53■■□□□ 1.36
COPS6-210ENST00000496358 RPGRQ92834 1020 aaKnown RBP23.53■■□□□ 1.36
COPS6-210ENST00000496358 MYD88Q99836 296 aa23.53■■□□□ 1.36
COPS6-210ENST00000496358 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
COPS6-210ENST00000496358 CCDC88AQ3V6T2 1871 aa23.52■■□□□ 1.36
COPS6-210ENST00000496358 KSR2Q6VAB6 950 aa23.52■■□□□ 1.36
COPS6-210ENST00000496358 G2E3Q7L622 706 aa23.52■■□□□ 1.36
COPS6-210ENST00000496358 TRIM28Q13263 835 aaKnown RBP23.51■■□□□ 1.35
COPS6-210ENST00000496358 C9orf131Q5VYM1 1079 aa23.51■■□□□ 1.35
COPS6-210ENST00000496358 SYNE4Q8N205 404 aa23.51■■□□□ 1.35
COPS6-210ENST00000496358 METTL22Q9BUU2 404 aaPredicted RBP23.51■■□□□ 1.35
COPS6-210ENST00000496358 MAP3K2Q9Y2U5 619 aa23.51■■□□□ 1.35
COPS6-210ENST00000496358 FER1L6Q2WGJ9 1857 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 PI4KAP2A4QPH2 592 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 HCLS1P14317 486 aaPredicted RBP23.5■■□□□ 1.35
COPS6-210ENST00000496358 RASSF7Q02833 373 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 PI4KAP1Q8N8J0 262 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 ADCY9O60503 1353 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 LAMB2P55268 1798 aa23.5■■□□□ 1.35
COPS6-210ENST00000496358 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
COPS6-210ENST00000496358 FLIIQ13045 1269 aa23.49■■□□□ 1.35
COPS6-210ENST00000496358 SOGA3Q5TF21 947 aa23.49■■□□□ 1.35
COPS6-210ENST00000496358 C3orf67Q6ZVT6 689 aa23.49■■□□□ 1.35
COPS6-210ENST00000496358 FAM89AQ96GI7 184 aa23.49■■□□□ 1.35
COPS6-210ENST00000496358 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
COPS6-210ENST00000496358 HOXA10P31260 410 aaPredicted RBP23.48■■□□□ 1.35
COPS6-210ENST00000496358 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
COPS6-210ENST00000496358 NFKBIEO00221 500 aa23.47■■□□□ 1.35
COPS6-210ENST00000496358 NEXNQ0ZGT2 675 aa23.47■■□□□ 1.35
COPS6-210ENST00000496358 FKBP5Q13451 457 aaPredicted RBP23.47■■□□□ 1.35
COPS6-210ENST00000496358 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
COPS6-210ENST00000496358 CCDC191Q8NCU4 936 aa23.47■■□□□ 1.35
COPS6-210ENST00000496358 CDCA7LQ96GN5 454 aa23.47■■□□□ 1.35
COPS6-210ENST00000496358 DDX60Q8IY21 1712 aaKnown RBP23.47■■□□□ 1.35
COPS6-210ENST00000496358 LMNB1P20700 586 aa23.46■■□□□ 1.35
COPS6-210ENST00000496358 C7orf43Q8WVR3 580 aa23.46■■□□□ 1.35
COPS6-210ENST00000496358 CRAMP1Q96RY5 1269 aa23.46■■□□□ 1.35
COPS6-210ENST00000496358 CWC25Q9NXE8 425 aaPredicted RBP23.46■■□□□ 1.35
COPS6-210ENST00000496358 CCDC93Q567U6 631 aa23.45■■□□□ 1.34
COPS6-210ENST00000496358 ZBTB38Q8NAP3 1195 aaPredicted RBP23.44■■□□□ 1.34
COPS6-210ENST00000496358 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
COPS6-210ENST00000496358 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
COPS6-210ENST00000496358 IRS4O14654 1257 aaPredicted RBP23.43■■□□□ 1.34
COPS6-210ENST00000496358 PCCAP05165 728 aaPredicted RBP23.42■■□□□ 1.34
COPS6-210ENST00000496358 IGKV5-2P06315 115 aa23.42■■□□□ 1.34
COPS6-210ENST00000496358 PRELPP51888 382 aa23.42■■□□□ 1.34
COPS6-210ENST00000496358 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
COPS6-210ENST00000496358 DDX46Q7L014 1031 aaKnown RBP23.42■■□□□ 1.34
COPS6-210ENST00000496358 DNAAF4Q8WXU2 420 aa23.42■■□□□ 1.34
COPS6-210ENST00000496358 GPBP1L1Q9HC44 474 aaPredicted RBP23.42■■□□□ 1.34
COPS6-210ENST00000496358 DICER1Q9UPY3 1922 aaKnown RBP23.41■■□□□ 1.34
COPS6-210ENST00000496358 LTBP3Q9NS15 1303 aa23.41■■□□□ 1.34
COPS6-210ENST00000496358 PPEF1O14829 653 aaPredicted RBP23.41■■□□□ 1.34
COPS6-210ENST00000496358 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
COPS6-210ENST00000496358 RTKN2Q8IZC4 609 aa23.41■■□□□ 1.34
COPS6-210ENST00000496358 TAF1P21675 1872 aa23.41■■□□□ 1.34
COPS6-210ENST00000496358 ABCC4O15439 1325 aa23.4■■□□□ 1.34
COPS6-210ENST00000496358 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
COPS6-210ENST00000496358 CC2D2BQ6DHV5 1058 aa23.4■■□□□ 1.34
COPS6-210ENST00000496358 TRMT2AQ8IZ69 625 aaKnown RBP23.4■■□□□ 1.34
COPS6-210ENST00000496358 JARID2Q92833 1246 aaPredicted RBP23.4■■□□□ 1.34
COPS6-210ENST00000496358 NEURL1BA8MQ27 555 aa23.39■■□□□ 1.33
COPS6-210ENST00000496358 TMX4Q9H1E5 349 aaPredicted RBP23.39■■□□□ 1.33
COPS6-210ENST00000496358 TIAM2Q8IVF5 1701 aa23.39■■□□□ 1.33
COPS6-210ENST00000496358 HNRNPUQ00839 825 aaKnown RBP eCLIP23.38■■□□□ 1.33
COPS6-210ENST00000496358 FKBP4Q02790 459 aaKnown RBP eCLIP23.38■■□□□ 1.33
COPS6-210ENST00000496358 SF3B3Q15393 1217 aaKnown RBP23.38■■□□□ 1.33
COPS6-210ENST00000496358 BBOX1O75936 387 aa23.37■■□□□ 1.33
COPS6-210ENST00000496358 ZC3H4Q9UPT8 1303 aaKnown RBP23.36■■□□□ 1.33
COPS6-210ENST00000496358 F6X3S4 739 aa23.36■■□□□ 1.33
COPS6-210ENST00000496358 PDE8AO60658 829 aa23.36■■□□□ 1.33
COPS6-210ENST00000496358 GRAPQ13588 217 aa23.36■■□□□ 1.33
COPS6-210ENST00000496358 GRIPAP1Q4V328 841 aa23.36■■□□□ 1.33
COPS6-210ENST00000496358 LINS1Q8NG48 757 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms