RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
PRPF3-207ENST00000496202 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
PRPF3-207ENST00000496202 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
PRPF3-207ENST00000496202 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
PRPF3-207ENST00000496202 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.44
PRPF3-207ENST00000496202 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
PRPF3-207ENST00000496202 SUSD4Q5VX71 490 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
PRPF3-207ENST00000496202 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
PRPF3-207ENST00000496202 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.45
PRPF3-207ENST00000496202 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
PRPF3-207ENST00000496202 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
PRPF3-207ENST00000496202 BCAR3O75815 825 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 NTSR2O95665 410 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
PRPF3-207ENST00000496202 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 LINS1Q8NG48 757 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 RCAN3Q9UKA8 241 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
PRPF3-207ENST00000496202 ANKRD31Q8N7Z5 1873 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 PDE6BP35913 854 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 BRIP1Q9BX63 1249 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
PRPF3-207ENST00000496202 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 IGKV5-2P06315 115 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
PRPF3-207ENST00000496202 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
PRPF3-207ENST00000496202 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-207ENST00000496202 ZKSCAN2Q63HK3 967 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-207ENST00000496202 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 ABCC12Q96J65 1359 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
PRPF3-207ENST00000496202 LAMB2P55268 1798 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 RIC1Q4ADV7 1423 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 H0YIN7 160 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
PRPF3-207ENST00000496202 TGFB2P61812 414 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 BEND3Q5T5X7 828 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
PRPF3-207ENST00000496202 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
PRPF3-207ENST00000496202 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
PRPF3-207ENST00000496202 A0A0G2JLW4 131 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 DPEP1P16444 411 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 GCKRQ14397 625 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
PRPF3-207ENST00000496202 COL11A2P13942 1736 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
PRPF3-207ENST00000496202 MYH3P11055 1940 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
PRPF3-207ENST00000496202 KIAA1551Q9HCM1 1747 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 IRS4O14654 1257 aaPredicted RBP12.21□□□□□ -0.45
PRPF3-207ENST00000496202 CHRNA5P30532 468 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
PRPF3-207ENST00000496202 CLUAP1Q96AJ1 413 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 NLRP3Q96P20 1036 aa12.21□□□□□ -0.45
PRPF3-207ENST00000496202 ABCC4O15439 1325 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 GRM8O00222 908 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 MS4A1P11836 297 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 TRIM27P14373 513 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 SYNE4Q8N205 404 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 JARID2Q92833 1246 aaPredicted RBP12.2□□□□□ -0.46
PRPF3-207ENST00000496202 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■□□ 16.8
PRPF3-207ENST00000496202 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 WWC3Q9ULE0 1092 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
PRPF3-207ENST00000496202 NPR1P16066 1061 aa12.19□□□□□ -0.46
PRPF3-207ENST00000496202 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
PRPF3-207ENST00000496202 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
PRPF3-207ENST00000496202 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
PRPF3-207ENST00000496202 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
PRPF3-207ENST00000496202 BRCA1P38398 1863 aaKnown RBP12.19□□□□□ -0.46
PRPF3-207ENST00000496202 H7C1W4 665 aa12.18□□□□□ -0.46
PRPF3-207ENST00000496202 PDE8AO60658 829 aa12.18□□□□□ -0.46
PRPF3-207ENST00000496202 SRGNP10124 158 aa12.18□□□□□ -0.46
PRPF3-207ENST00000496202 GPR162Q16538 588 aa12.18□□□□□ -0.46
PRPF3-207ENST00000496202 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
PRPF3-207ENST00000496202 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
PRPF3-207ENST00000496202 RBM17Q96I25 401 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms