RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 RIC3Q7Z5B4 369 aa27.34■■□□□ 1.97
PPM1F-208ENST00000496143 C21orf2O43822 256 aa27.33■■□□□ 1.97
PPM1F-208ENST00000496143 C9orf131Q5VYM1 1079 aa27.33■■□□□ 1.97
PPM1F-208ENST00000496143 PHAXQ9H814 394 aaKnown RBP27.33■■□□□ 1.97
PPM1F-208ENST00000496143 CRY2Q49AN0 593 aa27.32■■□□□ 1.96
PPM1F-208ENST00000496143 RPGRQ92834 1020 aaKnown RBP27.32■■□□□ 1.96
PPM1F-208ENST00000496143 TRMT112Q9UI30 125 aaKnown RBP27.32■■□□□ 1.96
PPM1F-208ENST00000496143 NLRP3Q96P20 1036 aa27.31■■□□□ 1.96
PPM1F-208ENST00000496143 RNF181Q9P0P0 153 aa27.31■■□□□ 1.96
PPM1F-208ENST00000496143 ZNF219Q9P2Y4 722 aaPredicted RBP27.31■■□□□ 1.96
PPM1F-208ENST00000496143 SLC10A5Q5PT55 438 aa27.3■■□□□ 1.96
PPM1F-208ENST00000496143 ISCA1Q9BUE6 129 aa27.3■■□□□ 1.96
PPM1F-208ENST00000496143 GPBP1L1Q9HC44 474 aaPredicted RBP27.3■■□□□ 1.96
PPM1F-208ENST00000496143 LMNB1P20700 586 aa27.29■■□□□ 1.96
PPM1F-208ENST00000496143 DIEXFQ68CQ4 756 aaKnown RBP27.29■■□□□ 1.96
PPM1F-208ENST00000496143 SH3TC1Q8TE82 1336 aa27.29■■□□□ 1.96
PPM1F-208ENST00000496143 TNRC6CQ9HCJ0 1690 aaKnown RBP27.29■■□□□ 1.96
PPM1F-208ENST00000496143 ARFGEF2Q9Y6D5 1785 aa27.29■■□□□ 1.96
PPM1F-208ENST00000496143 RASSF7Q02833 373 aa27.28■■□□□ 1.96
PPM1F-208ENST00000496143 EXOSC9Q06265 439 aaKnown RBP27.28■■□□□ 1.96
PPM1F-208ENST00000496143 RBM17Q96I25 401 aaKnown RBP27.28■■□□□ 1.96
PPM1F-208ENST00000496143 TRIM28Q13263 835 aaKnown RBP27.27■■□□□ 1.96
PPM1F-208ENST00000496143 CCDC93Q567U6 631 aa27.27■■□□□ 1.96
PPM1F-208ENST00000496143 ZNF521Q96K83 1311 aa27.26■■□□□ 1.95
PPM1F-208ENST00000496143 ATP5J2-PTCD1G3V325 749 aa27.26■■□□□ 1.95
PPM1F-208ENST00000496143 HOXA10P31260 410 aaPredicted RBP27.26■■□□□ 1.95
PPM1F-208ENST00000496143 SLX4Q8IY92 1834 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 LTBP3Q9NS15 1303 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 ZC3H4Q9UPT8 1303 aaKnown RBP27.25■■□□□ 1.95
PPM1F-208ENST00000496143 NFKBIEO00221 500 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 SLC4A2P04920 1241 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 ZNF526Q8TF50 670 aaPredicted RBP27.25■■□□□ 1.95
PPM1F-208ENST00000496143 CRAMP1Q96RY5 1269 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 TAOK3Q9H2K8 898 aa27.25■■□□□ 1.95
PPM1F-208ENST00000496143 SPINK5Q9NQ38 1064 aaPredicted RBP27.25■■□□□ 1.95
PPM1F-208ENST00000496143 TCERG1O14776 1098 aaKnown RBP27.24■■□□□ 1.95
PPM1F-208ENST00000496143 VAMP4O75379 141 aa27.24■■□□□ 1.95
PPM1F-208ENST00000496143 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
PPM1F-208ENST00000496143 KSR2Q6VAB6 950 aa27.23■■□□□ 1.95
PPM1F-208ENST00000496143 C7orf43Q8WVR3 580 aa27.23■■□□□ 1.95
PPM1F-208ENST00000496143 MYD88Q99836 296 aa27.23■■□□□ 1.95
PPM1F-208ENST00000496143 METTL22Q9BUU2 404 aaPredicted RBP27.23■■□□□ 1.95
PPM1F-208ENST00000496143 HSP90B1P14625 803 aaKnown RBP27.22■■□□□ 1.95
PPM1F-208ENST00000496143 CC2D2BQ6DHV5 1058 aa27.22■■□□□ 1.95
PPM1F-208ENST00000496143 RTKN2Q8IZC4 609 aa27.22■■□□□ 1.95
PPM1F-208ENST00000496143 E9PSI1 815 aa27.21■■□□□ 1.95
PPM1F-208ENST00000496143 HCLS1P14317 486 aaPredicted RBP27.21■■□□□ 1.95
PPM1F-208ENST00000496143 NEXNQ0ZGT2 675 aa27.21■■□□□ 1.95
PPM1F-208ENST00000496143 CCDC191Q8NCU4 936 aa27.21■■□□□ 1.95
PPM1F-208ENST00000496143 MAP3K2Q9Y2U5 619 aa27.21■■□□□ 1.95
PPM1F-208ENST00000496143 PI4KAP2A4QPH2 592 aa27.2■■□□□ 1.94
PPM1F-208ENST00000496143 GRIPAP1Q4V328 841 aa27.2■■□□□ 1.94
PPM1F-208ENST00000496143 PI4KAP1Q8N8J0 262 aa27.2■■□□□ 1.94
PPM1F-208ENST00000496143 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
PPM1F-208ENST00000496143 TMX4Q9H1E5 349 aaPredicted RBP27.2■■□□□ 1.94
PPM1F-208ENST00000496143 KDM2BQ8NHM5 1336 aa27.19■■□□□ 1.94
PPM1F-208ENST00000496143 SBF1O95248 1867 aa27.19■■□□□ 1.94
PPM1F-208ENST00000496143 FER1L6Q2WGJ9 1857 aa27.19■■□□□ 1.94
PPM1F-208ENST00000496143 FLIIQ13045 1269 aa27.19■■□□□ 1.94
PPM1F-208ENST00000496143 C3orf67Q6ZVT6 689 aa27.19■■□□□ 1.94
PPM1F-208ENST00000496143 CWC25Q9NXE8 425 aaPredicted RBP27.19■■□□□ 1.94
PPM1F-208ENST00000496143 SYNE4Q8N205 404 aa27.18■■□□□ 1.94
PPM1F-208ENST00000496143 ZBTB38Q8NAP3 1195 aaPredicted RBP27.18■■□□□ 1.94
PPM1F-208ENST00000496143 PPEF1O14829 653 aaPredicted RBP27.17■■□□□ 1.94
PPM1F-208ENST00000496143 FKBP4Q02790 459 aaKnown RBP eCLIP27.17■■□□□ 1.94
PPM1F-208ENST00000496143 FKBP5Q13451 457 aaPredicted RBP27.17■■□□□ 1.94
PPM1F-208ENST00000496143 DDX46Q7L014 1031 aaKnown RBP27.17■■□□□ 1.94
PPM1F-208ENST00000496143 ZNF428Q96B54 188 aa27.17■■□□□ 1.94
PPM1F-208ENST00000496143 IRS4O14654 1257 aaPredicted RBP27.16■■□□□ 1.94
PPM1F-208ENST00000496143 PRELPP51888 382 aa27.16■■□□□ 1.94
PPM1F-208ENST00000496143 G2E3Q7L622 706 aa27.16■■□□□ 1.94
PPM1F-208ENST00000496143 PCCAP05165 728 aaPredicted RBP27.15■■□□□ 1.94
PPM1F-208ENST00000496143 ABCC4O15439 1325 aa27.15■■□□□ 1.94
PPM1F-208ENST00000496143 BBOX1O75936 387 aa27.14■■□□□ 1.94
PPM1F-208ENST00000496143 RTL5Q5HYW3 569 aaPredicted RBP27.14■■□□□ 1.94
PPM1F-208ENST00000496143 MIER1Q8N108 512 aa27.14■■□□□ 1.94
PPM1F-208ENST00000496143 CACNA1FO60840 1977 aa27.13■■□□□ 1.93
PPM1F-208ENST00000496143 SF3B3Q15393 1217 aaKnown RBP27.13■■□□□ 1.93
PPM1F-208ENST00000496143 SLFN5Q08AF3 891 aa27.12■■□□□ 1.93
PPM1F-208ENST00000496143 GRAPQ13588 217 aa27.12■■□□□ 1.93
PPM1F-208ENST00000496143 OLFM4Q6UX06 510 aa27.12■■□□□ 1.93
PPM1F-208ENST00000496143 GRAPLQ8TC17 118 aaPredicted RBP27.12■■□□□ 1.93
PPM1F-208ENST00000496143 PSMD1Q99460 953 aa27.12■■□□□ 1.93
PPM1F-208ENST00000496143 TIAM2Q8IVF5 1701 aa27.11■■□□□ 1.93
PPM1F-208ENST00000496143 DPY19L2Q6NUT2 758 aa27.11■■□□□ 1.93
PPM1F-208ENST00000496143 TMC4Q7Z404 712 aa27.11■■□□□ 1.93
PPM1F-208ENST00000496143 DNAAF4Q8WXU2 420 aa27.11■■□□□ 1.93
PPM1F-208ENST00000496143 ATP6V0A2Q9Y487 856 aa27.11■■□□□ 1.93
PPM1F-208ENST00000496143 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
PPM1F-208ENST00000496143 LAMB2P55268 1798 aa27.1■■□□□ 1.93
PPM1F-208ENST00000496143 IGKV5-2P06315 115 aa27.1■■□□□ 1.93
PPM1F-208ENST00000496143 C1QTNF8P60827 252 aa27.1■■□□□ 1.93
PPM1F-208ENST00000496143 GLTPD2A6NH11 291 aa27.09■■□□□ 1.93
PPM1F-208ENST00000496143 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
PPM1F-208ENST00000496143 CDHR2Q9BYE9 1310 aa27.09■■□□□ 1.93
PPM1F-208ENST00000496143 CCDC88AQ3V6T2 1871 aa27.08■■□□□ 1.93
PPM1F-208ENST00000496143 NEURL1BA8MQ27 555 aa27.08■■□□□ 1.93
PPM1F-208ENST00000496143 PDE8AO60658 829 aa27.08■■□□□ 1.93
PPM1F-208ENST00000496143 NMRK2Q9NPI5 230 aa27.08■■□□□ 1.93
PPM1F-208ENST00000496143 KIF3CO14782 793 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms