RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 NTSR2O95665 410 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
CCDC13-209ENST00000496027 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
CCDC13-209ENST00000496027 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
CCDC13-209ENST00000496027 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 LTBP3Q9NS15 1303 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 GOLGB1Q14789 3259 aaKnown RBP17.16■□□□□ 0.34
CCDC13-209ENST00000496027 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
CCDC13-209ENST00000496027 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
CCDC13-209ENST00000496027 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
CCDC13-209ENST00000496027 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
CCDC13-209ENST00000496027 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CCDC13-209ENST00000496027 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
CCDC13-209ENST00000496027 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
CCDC13-209ENST00000496027 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
CCDC13-209ENST00000496027 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
CCDC13-209ENST00000496027 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
CCDC13-209ENST00000496027 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
CCDC13-209ENST00000496027 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
CCDC13-209ENST00000496027 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
CCDC13-209ENST00000496027 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
CCDC13-209ENST00000496027 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
CCDC13-209ENST00000496027 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
CCDC13-209ENST00000496027 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
CCDC13-209ENST00000496027 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
CCDC13-209ENST00000496027 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
CCDC13-209ENST00000496027 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
CCDC13-209ENST00000496027 TAOK3Q9H2K8 898 aa17.12■□□□□ 0.33
CCDC13-209ENST00000496027 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
CCDC13-209ENST00000496027 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
CCDC13-209ENST00000496027 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
CCDC13-209ENST00000496027 BBOX1O75936 387 aa17.11■□□□□ 0.33
CCDC13-209ENST00000496027 CCDC191Q8NCU4 936 aa17.11■□□□□ 0.33
CCDC13-209ENST00000496027 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
CCDC13-209ENST00000496027 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
CCDC13-209ENST00000496027 NFKBIEO00221 500 aa17.1■□□□□ 0.33
CCDC13-209ENST00000496027 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
CCDC13-209ENST00000496027 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
CCDC13-209ENST00000496027 GLTPD2A6NH11 291 aa17.09■□□□□ 0.33
CCDC13-209ENST00000496027 VAMP4O75379 141 aa17.09■□□□□ 0.33
CCDC13-209ENST00000496027 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC13-209ENST00000496027 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
CCDC13-209ENST00000496027 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
CCDC13-209ENST00000496027 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-209ENST00000496027 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-209ENST00000496027 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
CCDC13-209ENST00000496027 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
CCDC13-209ENST00000496027 RASSF7Q02833 373 aa17.08■□□□□ 0.32
CCDC13-209ENST00000496027 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
CCDC13-209ENST00000496027 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
CCDC13-209ENST00000496027 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
CCDC13-209ENST00000496027 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
CCDC13-209ENST00000496027 PSMD1Q99460 953 aa17.07■□□□□ 0.32
CCDC13-209ENST00000496027 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
CCDC13-209ENST00000496027 TOMM70O94826 608 aa17.06■□□□□ 0.32
CCDC13-209ENST00000496027 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
CCDC13-209ENST00000496027 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
CCDC13-209ENST00000496027 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
CCDC13-209ENST00000496027 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
CCDC13-209ENST00000496027 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
CCDC13-209ENST00000496027 PI4KAP2A4QPH2 592 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
CCDC13-209ENST00000496027 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 PI4KAP1Q8N8J0 262 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 FAM89AQ96GI7 184 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 MYD88Q99836 296 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
CCDC13-209ENST00000496027 ZNF521Q96K83 1311 aa17.04■□□□□ 0.32
CCDC13-209ENST00000496027 E9PSI1 815 aa17.04■□□□□ 0.32
CCDC13-209ENST00000496027 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-209ENST00000496027 KIF3CO14782 793 aa17.04■□□□□ 0.32
CCDC13-209ENST00000496027 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-209ENST00000496027 PCCAP05165 728 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-209ENST00000496027 PRELPP51888 382 aa17.04■□□□□ 0.32
CCDC13-209ENST00000496027 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
CCDC13-209ENST00000496027 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
CCDC13-209ENST00000496027 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
CCDC13-209ENST00000496027 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
CCDC13-209ENST00000496027 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
CCDC13-209ENST00000496027 FLIIQ13045 1269 aa17.02■□□□□ 0.32
CCDC13-209ENST00000496027 GRAPQ13588 217 aa17.02■□□□□ 0.32
CCDC13-209ENST00000496027 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
CCDC13-209ENST00000496027 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
CCDC13-209ENST00000496027 LAMB2P55268 1798 aa17.02■□□□□ 0.31
CCDC13-209ENST00000496027 PDE8AO60658 829 aa17.01■□□□□ 0.31
CCDC13-209ENST00000496027 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
CCDC13-209ENST00000496027 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
CCDC13-209ENST00000496027 RBM46Q8TBY0 533 aaKnown RBP17.01■□□□□ 0.31
CCDC13-209ENST00000496027 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
CCDC13-209ENST00000496027 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
CCDC13-209ENST00000496027 ABCC4O15439 1325 aa17■□□□□ 0.31
CCDC13-209ENST00000496027 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
CCDC13-209ENST00000496027 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
CCDC13-209ENST00000496027 CDHR2Q9BYE9 1310 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms