RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 IGKV5-2P06315 115 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 TRIM28Q13263 835 aaKnown RBP26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 TCIRG1Q13488 830 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 HSP90AB3PQ58FF7 597 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 MYD88Q99836 296 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 C10orf71Q711Q0 1435 aa26.12■■□□□ 1.77
SPOCK2-208ENST00000495888 ARHGEF1Q92888 912 aaKnown RBP26.11■■□□□ 1.77
SPOCK2-208ENST00000495888 ISCA1Q9BUE6 129 aa26.11■■□□□ 1.77
SPOCK2-208ENST00000495888 ZBTB40Q9NUA8 1239 aa26.11■■□□□ 1.77
SPOCK2-208ENST00000495888 NEURL1BA8MQ27 555 aa26.1■■□□□ 1.77
SPOCK2-208ENST00000495888 CLEC4GQ6UXB4 293 aa26.1■■□□□ 1.77
SPOCK2-208ENST00000495888 NLGN1Q8N2Q7 840 aa26.1■■□□□ 1.77
SPOCK2-208ENST00000495888 BCORQ6W2J9 1755 aa26.1■■□□□ 1.77
SPOCK2-208ENST00000495888 GYS1P13807 737 aa26.09■■□□□ 1.77
SPOCK2-208ENST00000495888 HLFQ16534 295 aa26.09■■□□□ 1.77
SPOCK2-208ENST00000495888 WWC3Q9ULE0 1092 aa26.09■■□□□ 1.77
SPOCK2-208ENST00000495888 CWF19L2Q2TBE0 894 aaKnown RBP26.08■■□□□ 1.77
SPOCK2-208ENST00000495888 ZNF652Q9Y2D9 606 aa26.08■■□□□ 1.77
SPOCK2-208ENST00000495888 SCN7AQ01118 1682 aa26.08■■□□□ 1.77
SPOCK2-208ENST00000495888 CEP350Q5VT06 3117 aa26.07■■□□□ 1.76
SPOCK2-208ENST00000495888 CCDC191Q8NCU4 936 aa26.07■■□□□ 1.76
SPOCK2-208ENST00000495888 USP44Q9H0E7 712 aa26.07■■□□□ 1.76
SPOCK2-208ENST00000495888 USP42Q9H9J4 1324 aaKnown RBP26.07■■□□□ 1.76
SPOCK2-208ENST00000495888 GNAI3P08754 354 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 RFC4P35249 363 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 TGFB2P61812 414 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 GCKRQ14397 625 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 ZNF34Q8IZ26 560 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 MEIS3Q99687 375 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 UTYO14607 1347 aa26.06■■□□□ 1.76
SPOCK2-208ENST00000495888 ATP5J2-PTCD1G3V325 749 aa26.05■■□□□ 1.76
SPOCK2-208ENST00000495888 ZPR1O75312 459 aa26.05■■□□□ 1.76
SPOCK2-208ENST00000495888 GPBP1L1Q9HC44 474 aaPredicted RBP26.05■■□□□ 1.76
SPOCK2-208ENST00000495888 NUP98P52948 1817 aa26.04■■□□□ 1.76
SPOCK2-208ENST00000495888 BCL2L12Q9HB09 334 aa26.04■■□□□ 1.76
SPOCK2-208ENST00000495888 CWC25Q9NXE8 425 aaPredicted RBP26.04■■□□□ 1.76
SPOCK2-208ENST00000495888 ANKRD36CQ5JPF3 1778 aa26.04■■□□□ 1.76
SPOCK2-208ENST00000495888 BRCA1P38398 1863 aaKnown RBP26.03■■□□□ 1.76
SPOCK2-208ENST00000495888 GRM8O00222 908 aa26.03■■□□□ 1.76
SPOCK2-208ENST00000495888 USPL1Q5W0Q7 1092 aa26.02■■□□□ 1.76
SPOCK2-208ENST00000495888 PPP4R2Q9NY27 417 aa26.02■■□□□ 1.76
SPOCK2-208ENST00000495888 SRP68Q9UHB9 627 aaKnown RBP26.02■■□□□ 1.76
SPOCK2-208ENST00000495888 NLRP10Q86W26 655 aa26.01■■□□□ 1.75
SPOCK2-208ENST00000495888 C9orf78Q9NZ63 289 aaPredicted RBP26.01■■□□□ 1.75
SPOCK2-208ENST00000495888 HDAC5Q9UQL6 1122 aa26.01■■□□□ 1.75
SPOCK2-208ENST00000495888 UBTFL1P0CB47 393 aaPredicted RBP26■■□□□ 1.75
SPOCK2-208ENST00000495888 PARP10Q53GL7 1025 aa26■■□□□ 1.75
SPOCK2-208ENST00000495888 AFDNP55196 1824 aaKnown RBP26■■□□□ 1.75
SPOCK2-208ENST00000495888 A0A0G2JLW4 131 aa25.99■■□□□ 1.75
SPOCK2-208ENST00000495888 H7C1W4 665 aa25.99■■□□□ 1.75
SPOCK2-208ENST00000495888 GNAI2P04899 355 aa25.99■■□□□ 1.75
SPOCK2-208ENST00000495888 PARP3Q9Y6F1 533 aa25.99■■□□□ 1.75
SPOCK2-208ENST00000495888 UBN2Q6ZU65 1347 aa25.98■■□□□ 1.75
SPOCK2-208ENST00000495888 NBPF7P0C2Y1 421 aaPredicted RBP25.98■■□□□ 1.75
SPOCK2-208ENST00000495888 GPTP24298 496 aa25.98■■□□□ 1.75
SPOCK2-208ENST00000495888 CASP7P55210 303 aa25.98■■□□□ 1.75
SPOCK2-208ENST00000495888 ZNF526Q8TF50 670 aaPredicted RBP25.98■■□□□ 1.75
SPOCK2-208ENST00000495888 NIP7Q9Y221 180 aaKnown RBP eCLIP25.97■■□□□ 1.75
SPOCK2-208ENST00000495888 PCCAP05165 728 aaPredicted RBP25.96■■□□□ 1.75
SPOCK2-208ENST00000495888 DPEP1P16444 411 aa25.96■■□□□ 1.75
SPOCK2-208ENST00000495888 ZBTB38Q8NAP3 1195 aaPredicted RBP25.96■■□□□ 1.75
SPOCK2-208ENST00000495888 BCS1LQ9Y276 419 aa25.96■■□□□ 1.75
SPOCK2-208ENST00000495888 PCDHB15Q9Y5E8 787 aa25.96■■□□□ 1.75
SPOCK2-208ENST00000495888 KCNA3P22001 575 aa25.95■■□□□ 1.74
SPOCK2-208ENST00000495888 TBC1D9BQ66K14 1250 aa25.95■■□□□ 1.74
SPOCK2-208ENST00000495888 ARFGEF1Q9Y6D6 1849 aa25.94■■□□□ 1.74
SPOCK2-208ENST00000495888 DDR1Q08345 913 aa25.94■■□□□ 1.74
SPOCK2-208ENST00000495888 UBE3BQ7Z3V4 1068 aa25.93■■□□□ 1.74
SPOCK2-208ENST00000495888 C1orf115Q9H7X2 142 aa25.93■■□□□ 1.74
SPOCK2-208ENST00000495888 LRRFIP2Q9Y608 721 aaKnown RBP25.93■■□□□ 1.74
SPOCK2-208ENST00000495888 CDHR2Q9BYE9 1310 aa25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 KIF3CO14782 793 aa25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 SUSD4Q5VX71 490 aa25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 PPP1R42Q7Z4L9 355 aa25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 RPAP2Q8IXW5 612 aaPredicted RBP25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 SETDB2Q96T68 719 aa25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 UTP14AQ9BVJ6 771 aaKnown RBP25.92■■□□□ 1.74
SPOCK2-208ENST00000495888 NTSR2O95665 410 aa25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 CEP85Q6P2H3 762 aa25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 ANKRD44Q8N8A2 993 aa25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 KAZALD1Q96I82 304 aa25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 SUCLG2Q96I99 432 aa25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 TRMT112Q9UI30 125 aaKnown RBP25.91■■□□□ 1.74
SPOCK2-208ENST00000495888 TM4SF1P30408 202 aa25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 MTX1Q13505 466 aa25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 HDAC1Q13547 482 aaPredicted RBP25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 NFIXQ14938 502 aa25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 PLA2G12BQ9BX93 195 aa25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 CARMIL3Q8ND23 1372 aa25.9■■□□□ 1.74
SPOCK2-208ENST00000495888 CCDC136Q96JN2 1154 aa25.89■■□□□ 1.74
SPOCK2-208ENST00000495888 NYXQ9GZU5 481 aa25.89■■□□□ 1.74
SPOCK2-208ENST00000495888 SH3TC1Q8TE82 1336 aa25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 POLRMTO00411 1230 aaKnown RBP25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 HSPA6P17066 643 aa25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 RABL6Q3YEC7 729 aaPredicted RBP25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 SIRT2Q8IXJ6 389 aa25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 FAM89AQ96GI7 184 aa25.88■■□□□ 1.73
SPOCK2-208ENST00000495888 NRXN2Q9P2S2 1712 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms