RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PIK3C2AO00443 1686 aa10.91□□□□□ -0.66
EPHA4-213ENST00000495693 KDRP35968 1356 aa10.9□□□□□ -0.66
EPHA4-213ENST00000495693 LILRB3O75022 631 aa10.9□□□□□ -0.66
EPHA4-213ENST00000495693 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
EPHA4-213ENST00000495693 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
EPHA4-213ENST00000495693 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
EPHA4-213ENST00000495693 BACH2Q9BYV9 841 aa10.9□□□□□ -0.66
EPHA4-213ENST00000495693 API5Q9BZZ5 524 aaKnown RBP10.9□□□□□ -0.66
EPHA4-213ENST00000495693 BABAM1Q9NWV8 329 aa10.9□□□□□ -0.66
EPHA4-213ENST00000495693 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
EPHA4-213ENST00000495693 FCF1Q9Y324 198 aaKnown RBP10.9□□□□□ -0.66
EPHA4-213ENST00000495693 KIAA0232Q92628 1395 aa10.9□□□□□ -0.67
EPHA4-213ENST00000495693 EIF5BO60841 1220 aaKnown RBP10.89□□□□□ -0.67
EPHA4-213ENST00000495693 ZNF853P0CG23 659 aa10.89□□□□□ -0.67
EPHA4-213ENST00000495693 SULT6B1Q6IMI4 303 aa10.89□□□□□ -0.67
EPHA4-213ENST00000495693 DCCP43146 1447 aa10.89□□□□□ -0.67
EPHA4-213ENST00000495693 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 PHRF1Q9P1Y6 1649 aaKnown RBP10.88□□□□□ -0.67
EPHA4-213ENST00000495693 SLC19A1P41440 591 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 RPIAP49247 311 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 PANK1Q8TE04 598 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
EPHA4-213ENST00000495693 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
EPHA4-213ENST00000495693 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
EPHA4-213ENST00000495693 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
EPHA4-213ENST00000495693 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
EPHA4-213ENST00000495693 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
EPHA4-213ENST00000495693 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
EPHA4-213ENST00000495693 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
EPHA4-213ENST00000495693 TRIM27P14373 513 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 PSME1Q06323 249 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 QPCTQ16769 361 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 TWISTNBQ3B726 338 aaPredicted RBP10.86□□□□□ -0.67
EPHA4-213ENST00000495693 ITPRIPQ8IWB1 547 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
EPHA4-213ENST00000495693 PLEKHG2Q9H7P9 1386 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
EPHA4-213ENST00000495693 CFAP99D6REC4 459 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 VAMP4O75379 141 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 PTPRNQ16849 979 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 ANP32EQ9BTT0 268 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
EPHA4-213ENST00000495693 NOB1Q9ULX3 412 aaKnown RBP10.85□□□□□ -0.67
EPHA4-213ENST00000495693 PTPRCP08575 1304 aa10.84□□□□□ -0.67
EPHA4-213ENST00000495693 MST1RQ04912 1400 aa10.84□□□□□ -0.67
EPHA4-213ENST00000495693 HOXC9P31274 260 aa10.84□□□□□ -0.67
EPHA4-213ENST00000495693 HSP90AB2PQ58FF8 381 aa10.84□□□□□ -0.67
EPHA4-213ENST00000495693 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
EPHA4-213ENST00000495693 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
EPHA4-213ENST00000495693 CHL1O00533 1208 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 CSPP1Q1MSJ5 1256 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 PPP2R2DQ66LE6 453 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
EPHA4-213ENST00000495693 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
EPHA4-213ENST00000495693 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-213ENST00000495693 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-213ENST00000495693 FBLN1P23142 703 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
EPHA4-213ENST00000495693 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-213ENST00000495693 IP6K1Q92551 441 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 GCC1Q96CN9 775 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 SLIT3O75094 1523 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 NFAT5O94916 1531 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 ABCC6O95255 1503 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 ABCC4O15439 1325 aa10.82□□□□□ -0.68
EPHA4-213ENST00000495693 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
EPHA4-213ENST00000495693 LMTK3Q96Q04 1460 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 MARF1Q9Y4F3 1742 aaKnown RBP10.81□□□□□ -0.68
EPHA4-213ENST00000495693 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 CCNYL3P0C7X3 344 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 RLBP1P12271 317 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 PROSER2Q86WR7 435 aaPredicted RBP10.81□□□□□ -0.68
EPHA4-213ENST00000495693 PROCA1Q8NCQ7 364 aaPredicted RBP10.81□□□□□ -0.68
EPHA4-213ENST00000495693 ZBTB40Q9NUA8 1239 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 NCAPD2Q15021 1401 aa10.81□□□□□ -0.68
EPHA4-213ENST00000495693 LTN1O94822 1766 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 ATF3P18847 181 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 RGS3P49796 1198 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 AMOTQ4VCS5 1084 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 TMEM57Q8N5G2 664 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 EVA1BQ9NVM1 165 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 OVOS2A0A0G2JMS6 1433 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 CRB1P82279 1406 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 C1orf167Q5SNV9 1468 aa10.8□□□□□ -0.68
EPHA4-213ENST00000495693 ZBTB24O43167 697 aaPredicted RBP10.79□□□□□ -0.68
EPHA4-213ENST00000495693 CD2BP2O95400 341 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms