RNA–Protein interactions for RNA: ENST00000495519.1

KDM5C-213, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-213ENST00000495519 IL16Q14005 1332 aa15.01□□□□□ -0.01
KDM5C-213ENST00000495519 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
KDM5C-213ENST00000495519 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
KDM5C-213ENST00000495519 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
KDM5C-213ENST00000495519 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
KDM5C-213ENST00000495519 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
KDM5C-213ENST00000495519 CACNA1SQ13698 1873 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 FER1L6Q2WGJ9 1857 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 KIF3CO14782 793 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 PRELPP51888 382 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 SLC10A5Q5PT55 438 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 NLRP10Q86W26 655 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 C7orf43Q8WVR3 580 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 NLRP3Q96P20 1036 aa15□□□□□ -0.01
KDM5C-213ENST00000495519 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
KDM5C-213ENST00000495519 HOXA10P31260 410 aaPredicted RBP14.99□□□□□ -0.01
KDM5C-213ENST00000495519 RTKN2Q8IZC4 609 aa14.99□□□□□ -0.01
KDM5C-213ENST00000495519 TSR2Q969E8 191 aaKnown RBP14.99□□□□□ -0.01
KDM5C-213ENST00000495519 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
KDM5C-213ENST00000495519 NMRK2Q9NPI5 230 aa14.99□□□□□ -0.01
KDM5C-213ENST00000495519 SH3TC1Q8TE82 1336 aa14.98□□□□□ -0.01
KDM5C-213ENST00000495519 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
KDM5C-213ENST00000495519 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
KDM5C-213ENST00000495519 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
KDM5C-213ENST00000495519 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
KDM5C-213ENST00000495519 GLTPD2A6NH11 291 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 RIC3Q7Z5B4 369 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 WDR63Q8IWG1 891 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 TSPYL6Q8N831 410 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
KDM5C-213ENST00000495519 TOMM70O94826 608 aa14.96□□□□□ -0.01
KDM5C-213ENST00000495519 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
KDM5C-213ENST00000495519 FKBP4Q02790 459 aaKnown RBP eCLIP14.96□□□□□ -0.01
KDM5C-213ENST00000495519 CCDC88AQ3V6T2 1871 aa14.96□□□□□ -0.01
KDM5C-213ENST00000495519 GRIPAP1Q4V328 841 aa14.96□□□□□ -0.01
KDM5C-213ENST00000495519 DPY19L2Q6NUT2 758 aa14.96□□□□□ -0.01
KDM5C-213ENST00000495519 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
KDM5C-213ENST00000495519 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
KDM5C-213ENST00000495519 PHAXQ9H814 394 aaKnown RBP14.96□□□□□ -0.01
KDM5C-213ENST00000495519 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
KDM5C-213ENST00000495519 ATP5J2-PTCD1G3V325 749 aa14.95□□□□□ -0.02
KDM5C-213ENST00000495519 TRIM28Q13263 835 aaKnown RBP14.95□□□□□ -0.02
KDM5C-213ENST00000495519 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
KDM5C-213ENST00000495519 C3orf67Q6ZVT6 689 aa14.95□□□□□ -0.02
KDM5C-213ENST00000495519 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
KDM5C-213ENST00000495519 DICER1Q9UPY3 1922 aaKnown RBP14.94□□□□□ -0.02
KDM5C-213ENST00000495519 PPEF1O14829 653 aaPredicted RBP14.94□□□□□ -0.02
KDM5C-213ENST00000495519 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
KDM5C-213ENST00000495519 OLFM4Q6UX06 510 aa14.94□□□□□ -0.02
KDM5C-213ENST00000495519 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
KDM5C-213ENST00000495519 RRAGCQ9HB90 399 aa14.94□□□□□ -0.02
KDM5C-213ENST00000495519 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
KDM5C-213ENST00000495519 PSMD1Q99460 953 aa14.93□□□□□ -0.02
KDM5C-213ENST00000495519 BBOX1O75936 387 aa14.92□□□□□ -0.02
KDM5C-213ENST00000495519 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
KDM5C-213ENST00000495519 DDX46Q7L014 1031 aaKnown RBP14.92□□□□□ -0.02
KDM5C-213ENST00000495519 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
KDM5C-213ENST00000495519 FAM89AQ96GI7 184 aa14.92□□□□□ -0.02
KDM5C-213ENST00000495519 ZNF277Q9NRM2 450 aaPredicted RBP14.92□□□□□ -0.02
KDM5C-213ENST00000495519 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
KDM5C-213ENST00000495519 ABCC4O15439 1325 aa14.92□□□□□ -0.02
KDM5C-213ENST00000495519 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
KDM5C-213ENST00000495519 HSPA6P17066 643 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 IARSP41252 1262 aaKnown RBP14.91□□□□□ -0.02
KDM5C-213ENST00000495519 CCDC191Q8NCU4 936 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 ZNF428Q96B54 188 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 MYD88Q99836 296 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 METTL22Q9BUU2 404 aaPredicted RBP14.91□□□□□ -0.02
KDM5C-213ENST00000495519 MYH16Q9H6N6 1097 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
KDM5C-213ENST00000495519 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
KDM5C-213ENST00000495519 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
KDM5C-213ENST00000495519 KSR2Q6VAB6 950 aa14.9□□□□□ -0.02
KDM5C-213ENST00000495519 ZBTB38Q8NAP3 1195 aaPredicted RBP14.9□□□□□ -0.02
KDM5C-213ENST00000495519 MAP3K2Q9Y2U5 619 aa14.9□□□□□ -0.02
KDM5C-213ENST00000495519 LAMB2P55268 1798 aa14.9□□□□□ -0.02
KDM5C-213ENST00000495519 WDR90Q96KV7 1748 aa14.89□□□□□ -0.03
KDM5C-213ENST00000495519 IRS4O14654 1257 aaPredicted RBP14.89□□□□□ -0.03
KDM5C-213ENST00000495519 FSTL1Q12841 308 aa14.89□□□□□ -0.03
KDM5C-213ENST00000495519 GRAPQ13588 217 aa14.89□□□□□ -0.03
KDM5C-213ENST00000495519 SF3B3Q15393 1217 aaKnown RBP14.89□□□□□ -0.03
KDM5C-213ENST00000495519 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
KDM5C-213ENST00000495519 GRAPLQ8TC17 118 aaPredicted RBP14.89□□□□□ -0.03
KDM5C-213ENST00000495519 JDP2Q8WYK2 163 aa14.89□□□□□ -0.03
KDM5C-213ENST00000495519 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
KDM5C-213ENST00000495519 PI4KAP2A4QPH2 592 aa14.88□□□□□ -0.03
KDM5C-213ENST00000495519 VAMP4O75379 141 aa14.88□□□□□ -0.03
KDM5C-213ENST00000495519 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
KDM5C-213ENST00000495519 NEXNQ0ZGT2 675 aa14.88□□□□□ -0.03
KDM5C-213ENST00000495519 RTL5Q5HYW3 569 aaPredicted RBP14.88□□□□□ -0.03
KDM5C-213ENST00000495519 SP8Q8IXZ3 490 aa14.88□□□□□ -0.03
KDM5C-213ENST00000495519 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
KDM5C-213ENST00000495519 DDX60Q8IY21 1712 aaKnown RBP14.88□□□□□ -0.03
KDM5C-213ENST00000495519 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
KDM5C-213ENST00000495519 PCCAP05165 728 aaPredicted RBP14.87□□□□□ -0.03
KDM5C-213ENST00000495519 SMC1BQ8NDV3 1235 aa14.87□□□□□ -0.03
KDM5C-213ENST00000495519 SUPT20HQ8NEM7 779 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms