RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, humanhuman

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-208ENST00000495040 ZNF853P0CG23 659 aa34.64■■■■□ 3.14
PLXNA3-208ENST00000495040 RPGRQ92834 1020 aaKnown RBP34.64■■■■□ 3.14
PLXNA3-208ENST00000495040 IFT57Q9NWB7 429 aa34.64■■■■□ 3.14
PLXNA3-208ENST00000495040 CHPF2Q9P2E5 772 aa34.64■■■■□ 3.14
PLXNA3-208ENST00000495040 ANKRD36CQ5JPF3 1778 aa34.64■■■■□ 3.14
PLXNA3-208ENST00000495040 RTKN2Q8IZC4 609 aa34.63■■■■□ 3.13
PLXNA3-208ENST00000495040 UTP14AQ9BVJ6 771 aaKnown RBP34.63■■■■□ 3.13
PLXNA3-208ENST00000495040 VEGFAP15692 232 aaPredicted RBP34.62■■■■□ 3.13
PLXNA3-208ENST00000495040 HOXA10P31260 410 aaPredicted RBP34.62■■■■□ 3.13
PLXNA3-208ENST00000495040 GNAI1P63096 354 aa34.62■■■■□ 3.13
PLXNA3-208ENST00000495040 DBF4Q9UBU7 674 aaPredicted RBP34.62■■■■□ 3.13
PLXNA3-208ENST00000495040 FKBP4Q02790 459 aaKnown RBP eCLIP34.61■■■■□ 3.13
PLXNA3-208ENST00000495040 DUSP27Q5VZP5 1158 aa34.61■■■■□ 3.13
PLXNA3-208ENST00000495040 RNF123Q5XPI4 1314 aa34.6■■■■□ 3.13
PLXNA3-208ENST00000495040 FSTL1Q12841 308 aa34.6■■■■□ 3.13
PLXNA3-208ENST00000495040 CCDC184Q52MB2 194 aa34.6■■■■□ 3.13
PLXNA3-208ENST00000495040 APLP1P51693 650 aa34.59■■■■□ 3.13
PLXNA3-208ENST00000495040 TCIRG1Q13488 830 aa34.59■■■■□ 3.13
PLXNA3-208ENST00000495040 OLFM4Q6UX06 510 aa34.59■■■■□ 3.13
PLXNA3-208ENST00000495040 NLRP3Q96P20 1036 aa34.59■■■■□ 3.13
PLXNA3-208ENST00000495040 SLC10A5Q5PT55 438 aa34.58■■■■□ 3.13
PLXNA3-208ENST00000495040 RBM17Q96I25 401 aaKnown RBP34.58■■■■□ 3.13
PLXNA3-208ENST00000495040 WDR90Q96KV7 1748 aa34.58■■■■□ 3.13
PLXNA3-208ENST00000495040 CC2D2BQ6DHV5 1058 aa34.57■■■■□ 3.12
PLXNA3-208ENST00000495040 CRAMP1Q96RY5 1269 aa34.57■■■■□ 3.12
PLXNA3-208ENST00000495040 NLRP10Q86W26 655 aa34.56■■■■□ 3.12
PLXNA3-208ENST00000495040 HYPKQ9NX55 129 aa34.56■■■■□ 3.12
PLXNA3-208ENST00000495040 PLBD2Q8NHP8 589 aa34.55■■■■□ 3.12
PLXNA3-208ENST00000495040 ANP32CO43423 234 aa34.54■■■■□ 3.12
PLXNA3-208ENST00000495040 ANKRD13DQ6ZTN6 518 aa34.54■■■■□ 3.12
PLXNA3-208ENST00000495040 SMC1BQ8NDV3 1235 aa34.54■■■■□ 3.12
PLXNA3-208ENST00000495040 ZNF277Q9NRM2 450 aaPredicted RBP34.54■■■■□ 3.12
PLXNA3-208ENST00000495040 C3orf67Q6ZVT6 689 aa34.53■■■■□ 3.12
PLXNA3-208ENST00000495040 POTECB2RU33 542 aa34.52■■■■□ 3.12
PLXNA3-208ENST00000495040 GRIPAP1Q4V328 841 aa34.52■■■■□ 3.12
PLXNA3-208ENST00000495040 PSMD1Q99460 953 aa34.52■■■■□ 3.12
PLXNA3-208ENST00000495040 SYNE4Q8N205 404 aa34.51■■■■□ 3.12
PLXNA3-208ENST00000495040 SNED1Q8TER0 1413 aa34.51■■■■□ 3.12
PLXNA3-208ENST00000495040 TRMT112Q9UI30 125 aaKnown RBP34.51■■■■□ 3.12
PLXNA3-208ENST00000495040 DDNO94850 711 aaPredicted RBP34.5■■■■□ 3.11
PLXNA3-208ENST00000495040 IARSP41252 1262 aaKnown RBP34.49■■■■□ 3.11
PLXNA3-208ENST00000495040 MRS2Q9HD23 443 aa34.49■■■■□ 3.11
PLXNA3-208ENST00000495040 SH3TC1Q8TE82 1336 aa34.49■■■■□ 3.11
PLXNA3-208ENST00000495040 ELL2O00472 640 aaPredicted RBP34.48■■■■□ 3.11
PLXNA3-208ENST00000495040 PPEF1O14829 653 aaPredicted RBP34.48■■■■□ 3.11
PLXNA3-208ENST00000495040 CCDC27Q2M243 656 aa34.48■■■■□ 3.11
PLXNA3-208ENST00000495040 CHMP4AQ9BY43 222 aa34.47■■■■□ 3.11
PLXNA3-208ENST00000495040 ISCA1Q9BUE6 129 aa34.46■■■■□ 3.11
PLXNA3-208ENST00000495040 LAMB2P55268 1798 aa34.46■■■■□ 3.11
PLXNA3-208ENST00000495040 HCLS1P14317 486 aaPredicted RBP34.45■■■■□ 3.11
PLXNA3-208ENST00000495040 C8orf58Q8NAV2 365 aa34.45■■■■□ 3.11
PLXNA3-208ENST00000495040 TMX4Q9H1E5 349 aaPredicted RBP34.45■■■■□ 3.11
PLXNA3-208ENST00000495040 TCERG1O14776 1098 aaKnown RBP34.43■■■■□ 3.1
PLXNA3-208ENST00000495040 ABCC4O15439 1325 aa34.43■■■■□ 3.1
PLXNA3-208ENST00000495040 GOLGA2Q08379 1002 aa34.42■■■■□ 3.1
PLXNA3-208ENST00000495040 NCBP3Q53F19 620 aaKnown RBP34.42■■■■□ 3.1
PLXNA3-208ENST00000495040 JDP2Q8WYK2 163 aa34.42■■■■□ 3.1
PLXNA3-208ENST00000495040 L3MBTL3Q96JM7 780 aaPredicted RBP34.42■■■■□ 3.1
PLXNA3-208ENST00000495040 IQCA1LA6NCM1 817 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 FZD9O00144 591 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 RIC3Q7Z5B4 369 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 WWC1Q8IX03 1113 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 ATP6V0A2Q9Y487 856 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 SCN4AP35499 1836 aa34.41■■■■□ 3.1
PLXNA3-208ENST00000495040 ZNF541Q9H0D2 1346 aa34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 ATP5J2-PTCD1G3V325 749 aa34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 BBOX1O75936 387 aa34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 TRIM28Q13263 835 aaKnown RBP34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 CCDC30Q5VVM6 783 aa34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 PHAXQ9H814 394 aaKnown RBP34.4■■■■□ 3.1
PLXNA3-208ENST00000495040 DDX46Q7L014 1031 aaKnown RBP34.39■■■■□ 3.1
PLXNA3-208ENST00000495040 DNAJC5GQ8N7S2 189 aa34.38■■■■□ 3.09
PLXNA3-208ENST00000495040 TSR2Q969E8 191 aaKnown RBP34.37■■■■□ 3.09
PLXNA3-208ENST00000495040 ZNF428Q96B54 188 aa34.37■■■■□ 3.09
PLXNA3-208ENST00000495040 FAM89AQ96GI7 184 aa34.37■■■■□ 3.09
PLXNA3-208ENST00000495040 DDX60Q8IY21 1712 aaKnown RBP34.37■■■■□ 3.09
PLXNA3-208ENST00000495040 SLC51AQ86UW1 340 aa34.36■■■■□ 3.09
PLXNA3-208ENST00000495040 IL16Q14005 1332 aa34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 GRAPQ13588 217 aa34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 SP8Q8IXZ3 490 aa34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 LARGE2Q8N3Y3 721 aa34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 TSPYL6Q8N831 410 aa34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 GRAPLQ8TC17 118 aaPredicted RBP34.35■■■■□ 3.09
PLXNA3-208ENST00000495040 GPC2Q8N158 579 aa34.34■■■■□ 3.09
PLXNA3-208ENST00000495040 DDX58O95786 925 aaKnown RBP34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 EIF6P56537 245 aaKnown RBP34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 HTRA3P83110 453 aa34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 CHADLQ6NUI6 762 aa34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 VPS33BQ9H267 617 aa34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 TAF1DQ9H5J8 278 aaPredicted RBP34.33■■■■□ 3.09
PLXNA3-208ENST00000495040 SF3B3Q15393 1217 aaKnown RBP34.32■■■■□ 3.08
PLXNA3-208ENST00000495040 SUPT20HQ8NEM7 779 aa34.32■■■■□ 3.08
PLXNA3-208ENST00000495040 COL4A5P29400 1685 aa34.31■■■■□ 3.08
PLXNA3-208ENST00000495040 TAF1P21675 1872 aa34.31■■■■□ 3.08
PLXNA3-208ENST00000495040 TMC4Q7Z404 712 aa34.31■■■■□ 3.08
PLXNA3-208ENST00000495040 MYD88Q99836 296 aa34.31■■■■□ 3.08
PLXNA3-208ENST00000495040 HACL1Q9UJ83 578 aa34.31■■■■□ 3.08
PLXNA3-208ENST00000495040 RTL5Q5HYW3 569 aaPredicted RBP34.3■■■■□ 3.08
PLXNA3-208ENST00000495040 RTFDC1Q9BY42 306 aaPredicted RBP34.3■■■■□ 3.08
PLXNA3-208ENST00000495040 IRS4O14654 1257 aaPredicted RBP34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms