RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ZNF784Q8NCA9 323 aaPredicted RBP18.5■□□□□ 0.55
SCAP-213ENST00000494938 CNKSR1Q969H4 720 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 C7orf43Q8WVR3 580 aa18.49■□□□□ 0.55
SCAP-213ENST00000494938 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
SCAP-213ENST00000494938 C21orf2O43822 256 aa18.48■□□□□ 0.55
SCAP-213ENST00000494938 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
SCAP-213ENST00000494938 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
SCAP-213ENST00000494938 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
SCAP-213ENST00000494938 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
SCAP-213ENST00000494938 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
SCAP-213ENST00000494938 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
SCAP-213ENST00000494938 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
SCAP-213ENST00000494938 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 E9PSI1 815 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
SCAP-213ENST00000494938 PRELPP51888 382 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 METTL22Q9BUU2 404 aaPredicted RBP18.46■□□□□ 0.55
SCAP-213ENST00000494938 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
SCAP-213ENST00000494938 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.54
SCAP-213ENST00000494938 DDX58O95786 925 aaKnown RBP18.45■□□□□ 0.54
SCAP-213ENST00000494938 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
SCAP-213ENST00000494938 C9orf131Q5VYM1 1079 aa18.45■□□□□ 0.54
SCAP-213ENST00000494938 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
SCAP-213ENST00000494938 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
SCAP-213ENST00000494938 MYD88Q99836 296 aa18.45■□□□□ 0.54
SCAP-213ENST00000494938 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
SCAP-213ENST00000494938 NUP98P52948 1817 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 RIC1Q4ADV7 1423 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 NFKBIEO00221 500 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 RASSF7Q02833 373 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 FAM89AQ96GI7 184 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
SCAP-213ENST00000494938 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
SCAP-213ENST00000494938 ADCY9O60503 1353 aa18.43■□□□□ 0.54
SCAP-213ENST00000494938 FLIIQ13045 1269 aa18.43■□□□□ 0.54
SCAP-213ENST00000494938 IGKV5-2P06315 115 aa18.42■□□□□ 0.54
SCAP-213ENST00000494938 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
SCAP-213ENST00000494938 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
SCAP-213ENST00000494938 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
SCAP-213ENST00000494938 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
SCAP-213ENST00000494938 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
SCAP-213ENST00000494938 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
SCAP-213ENST00000494938 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
SCAP-213ENST00000494938 CWC25Q9NXE8 425 aaPredicted RBP18.4■□□□□ 0.54
SCAP-213ENST00000494938 RNF181Q9P0P0 153 aa18.4■□□□□ 0.54
SCAP-213ENST00000494938 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.53
SCAP-213ENST00000494938 LMNB1P20700 586 aa18.39■□□□□ 0.53
SCAP-213ENST00000494938 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
SCAP-213ENST00000494938 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
SCAP-213ENST00000494938 COL11A2P13942 1736 aaPredicted RBP18.39■□□□□ 0.53
SCAP-213ENST00000494938 PCCAP05165 728 aaPredicted RBP18.38■□□□□ 0.53
SCAP-213ENST00000494938 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
SCAP-213ENST00000494938 SF3B3Q15393 1217 aaKnown RBP18.38■□□□□ 0.53
SCAP-213ENST00000494938 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
SCAP-213ENST00000494938 CHD4Q14839 1912 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 NEURL1BA8MQ27 555 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
SCAP-213ENST00000494938 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
SCAP-213ENST00000494938 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
SCAP-213ENST00000494938 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
SCAP-213ENST00000494938 ABCC4O15439 1325 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 BBOX1O75936 387 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 ZNF526Q8TF50 670 aaPredicted RBP18.36■□□□□ 0.53
SCAP-213ENST00000494938 TAOK3Q9H2K8 898 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
SCAP-213ENST00000494938 F6X3S4 739 aa18.35■□□□□ 0.53
SCAP-213ENST00000494938 H7C1W4 665 aa18.35■□□□□ 0.53
SCAP-213ENST00000494938 CC2D2BQ6DHV5 1058 aa18.35■□□□□ 0.53
SCAP-213ENST00000494938 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
SCAP-213ENST00000494938 SSH1Q8WYL5 1049 aa18.35■□□□□ 0.53
SCAP-213ENST00000494938 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
SCAP-213ENST00000494938 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCAP-213ENST00000494938 GCKRQ14397 625 aa18.34■□□□□ 0.53
SCAP-213ENST00000494938 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
SCAP-213ENST00000494938 GRAPQ13588 217 aa18.33■□□□□ 0.52
SCAP-213ENST00000494938 BEND3Q5T5X7 828 aa18.33■□□□□ 0.52
SCAP-213ENST00000494938 LINS1Q8NG48 757 aa18.33■□□□□ 0.52
SCAP-213ENST00000494938 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
SCAP-213ENST00000494938 GPBP1L1Q9HC44 474 aaPredicted RBP18.33■□□□□ 0.52
SCAP-213ENST00000494938 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
SCAP-213ENST00000494938 PDE8AO60658 829 aa18.32■□□□□ 0.52
SCAP-213ENST00000494938 CASP7P55210 303 aa18.32■□□□□ 0.52
SCAP-213ENST00000494938 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
SCAP-213ENST00000494938 PSMD1Q99460 953 aa18.32■□□□□ 0.52
SCAP-213ENST00000494938 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
SCAP-213ENST00000494938 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
SCAP-213ENST00000494938 HSP90B1P14625 803 aaKnown RBP18.31■□□□□ 0.52
SCAP-213ENST00000494938 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAP-213ENST00000494938 GRIPAP1Q4V328 841 aa18.31■□□□□ 0.52
SCAP-213ENST00000494938 CELF1Q92879 486 aaKnown RBP18.31■□□□□ 0.52
SCAP-213ENST00000494938 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
SCAP-213ENST00000494938 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms