RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 ZNF468Q5VIY5 522 aaPredicted RBP10.06□□□□□ -0.8
NCL-210ENST00000494618 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 GALNT6Q8NCL4 622 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 SAP130Q9H0E3 1048 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 GGA1Q9UJY5 639 aa10.06□□□□□ -0.8
NCL-210ENST00000494618 DNMT3AQ9Y6K1 912 aaPredicted RBP10.06□□□□□ -0.8
NCL-210ENST00000494618 ARSDP51689 593 aa10.05□□□□□ -0.8
NCL-210ENST00000494618 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
NCL-210ENST00000494618 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 RETREG2Q8NC44 543 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 EFCC1Q9HA90 598 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
NCL-210ENST00000494618 INPP5BP32019 993 aa10.03□□□□□ -0.8
NCL-210ENST00000494618 PCBP4P57723 403 aaKnown RBP10.03□□□□□ -0.8
NCL-210ENST00000494618 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
NCL-210ENST00000494618 C11orf16Q9NQ32 467 aa10.03□□□□□ -0.8
NCL-210ENST00000494618 STIM2Q9P246 746 aa10.03□□□□□ -0.8
NCL-210ENST00000494618 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
NCL-210ENST00000494618 ABTB2Q8N961 1025 aa10.02□□□□□ -0.81
NCL-210ENST00000494618 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
NCL-210ENST00000494618 FAM13BQ9NYF5 915 aa10.02□□□□□ -0.81
NCL-210ENST00000494618 SEPT3Q9UH03 358 aa10.02□□□□□ -0.81
NCL-210ENST00000494618 CCINQ13939 588 aa10.01□□□□□ -0.81
NCL-210ENST00000494618 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
NCL-210ENST00000494618 SIN3BO75182 1162 aa10□□□□□ -0.81
NCL-210ENST00000494618 EPXP11678 715 aa10□□□□□ -0.81
NCL-210ENST00000494618 AMPD1P23109 780 aa10□□□□□ -0.81
NCL-210ENST00000494618 ETFBKMTQ8IXQ9 262 aa10□□□□□ -0.81
NCL-210ENST00000494618 BHMTQ93088 406 aa10□□□□□ -0.81
NCL-210ENST00000494618 TNFRSF10BO14763 440 aa9.99□□□□□ -0.81
NCL-210ENST00000494618 OPLAHO14841 1288 aa9.99□□□□□ -0.81
NCL-210ENST00000494618 ALAS2P22557 587 aa9.99□□□□□ -0.81
NCL-210ENST00000494618 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
NCL-210ENST00000494618 GSX2Q9BZM3 304 aa9.99□□□□□ -0.81
NCL-210ENST00000494618 KLF15Q9UIH9 416 aa9.99□□□□□ -0.81
NCL-210ENST00000494618 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
NCL-210ENST00000494618 PHLDB3Q6NSJ2 640 aa9.98□□□□□ -0.81
NCL-210ENST00000494618 RAB44Q7Z6P3 723 aaPredicted RBP9.98□□□□□ -0.81
NCL-210ENST00000494618 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
NCL-210ENST00000494618 RGL4Q8IZJ4 473 aa9.98□□□□□ -0.81
NCL-210ENST00000494618 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
NCL-210ENST00000494618 HELQQ8TDG4 1101 aa9.98□□□□□ -0.81
NCL-210ENST00000494618 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
NCL-210ENST00000494618 SCARF2Q96GP6 870 aaPredicted RBP9.98□□□□□ -0.81
NCL-210ENST00000494618 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
NCL-210ENST00000494618 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
NCL-210ENST00000494618 ELOA3DA6NLF2 546 aaPredicted RBP9.97□□□□□ -0.81
NCL-210ENST00000494618 SHISA8B8ZZ34 492 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 SCNN1AP37088 669 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 ELOA3BQ3SY89 546 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 PODNQ7Z5L7 613 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 ELOA3Q8NG57 546 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
NCL-210ENST00000494618 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
NCL-210ENST00000494618 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
NCL-210ENST00000494618 ZAP70P43403 619 aa9.96□□□□□ -0.82
NCL-210ENST00000494618 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
NCL-210ENST00000494618 BTBD6Q96KE9 485 aa9.96□□□□□ -0.82
NCL-210ENST00000494618 RRAGCQ9HB90 399 aa9.96□□□□□ -0.82
NCL-210ENST00000494618 ADARB2-AS1A8MUL3 147 aa9.95□□□□□ -0.82
NCL-210ENST00000494618 BEND7Q8N7W2 519 aaPredicted RBP9.95□□□□□ -0.82
NCL-210ENST00000494618 XYLBO75191 536 aa9.94□□□□□ -0.82
NCL-210ENST00000494618 EGFRP00533 1210 aa9.94□□□□□ -0.82
NCL-210ENST00000494618 NFKB1P19838 968 aa9.94□□□□□ -0.82
NCL-210ENST00000494618 FNDC3AQ9Y2H6 1198 aaKnown RBP9.94□□□□□ -0.82
NCL-210ENST00000494618 USP20Q9Y2K6 914 aa9.94□□□□□ -0.82
NCL-210ENST00000494618 ABL1P00519 1130 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
NCL-210ENST00000494618 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
NCL-210ENST00000494618 PCSK7Q16549 785 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
NCL-210ENST00000494618 FAM26DQ5JW98 314 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 CHSY3Q70JA7 882 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 KRT25Q7Z3Z0 450 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 UBE2OQ9C0C9 1292 aaKnown RBP9.93□□□□□ -0.82
NCL-210ENST00000494618 IGFLR1Q9H665 355 aa9.93□□□□□ -0.82
NCL-210ENST00000494618 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 PIK3R2O00459 728 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 SASH3O75995 380 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 RARAP10276 462 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 ADH7P40394 386 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
NCL-210ENST00000494618 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 MKL2Q9ULH7 1088 aa9.92□□□□□ -0.82
NCL-210ENST00000494618 ZBTB39O15060 712 aa9.91□□□□□ -0.82
NCL-210ENST00000494618 FAM13AO94988 1023 aa9.91□□□□□ -0.82
NCL-210ENST00000494618 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
NCL-210ENST00000494618 TARSP26639 723 aaKnown RBP9.91□□□□□ -0.82
NCL-210ENST00000494618 GPR152Q8TDT2 470 aa9.91□□□□□ -0.82
NCL-210ENST00000494618 KCNMB2Q9Y691 235 aa9.91□□□□□ -0.82
NCL-210ENST00000494618 RPLP1P05386 114 aaKnown RBP9.9□□□□□ -0.82
NCL-210ENST00000494618 PCSK2P16519 638 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms