RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 BEND3Q5T5X7 828 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 IBTKQ9P2D0 1353 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-214ENST00000493786 ARFGEF2Q9Y6D5 1785 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 ABCC4O15439 1325 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 PLIN1O60240 522 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 IGKV5-2P06315 115 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
VEGFA-214ENST00000493786 CWF19L2Q2TBE0 894 aaKnown RBP9.59□□□□□ -0.87
VEGFA-214ENST00000493786 SUSD4Q5VX71 490 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 ITPRIPQ8IWB1 547 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 C9orf78Q9NZ63 289 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-214ENST00000493786 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
VEGFA-214ENST00000493786 NUP98P52948 1817 aa9.59□□□□□ -0.88
VEGFA-214ENST00000493786 NTSR2O95665 410 aa9.58□□□□□ -0.88
VEGFA-214ENST00000493786 PCCAP05165 728 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-214ENST00000493786 GCKRQ14397 625 aa9.58□□□□□ -0.88
VEGFA-214ENST00000493786 ZBTB38Q8NAP3 1195 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-214ENST00000493786 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
VEGFA-214ENST00000493786 GRM8O00222 908 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 PTGER2P43116 358 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
VEGFA-214ENST00000493786 INTS3Q68E01 1043 aaKnown RBP9.57□□□□□ -0.88
VEGFA-214ENST00000493786 PRR5LQ6MZQ0 368 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 UBE3BQ7Z3V4 1068 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 ANKRD36CQ5JPF3 1778 aa9.57□□□□□ -0.88
VEGFA-214ENST00000493786 IRS4O14654 1257 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-214ENST00000493786 GNAI3P08754 354 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 UBTFL1P0CB47 393 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-214ENST00000493786 PDE6BP35913 854 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 ERFEQ4G0M1 354 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 TMEM57Q8N5G2 664 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 NLRP3Q96P20 1036 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 SGIP1Q9BQI5 828 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 BRIP1Q9BX63 1249 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 TNNQ9UQP3 1299 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
VEGFA-214ENST00000493786 COL24A1Q17RW2 1714 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
VEGFA-214ENST00000493786 H7C1W4 665 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 PDE8AO60658 829 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 MVPQ14764 893 aaKnown RBP9.55□□□□□ -0.88
VEGFA-214ENST00000493786 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 RPGRQ92834 1020 aaKnown RBP9.55□□□□□ -0.88
VEGFA-214ENST00000493786 DDX19BQ9UMR2 479 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 CD2APQ9Y5K6 639 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 C10orf71Q711Q0 1435 aa9.55□□□□□ -0.88
VEGFA-214ENST00000493786 ABCC12Q96J65 1359 aa9.54□□□□□ -0.88
VEGFA-214ENST00000493786 H0YIN7 160 aa9.54□□□□□ -0.88
VEGFA-214ENST00000493786 RLBP1P12271 317 aa9.54□□□□□ -0.88
VEGFA-214ENST00000493786 HCLS1P14317 486 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-214ENST00000493786 JARID2Q92833 1246 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-214ENST00000493786 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
VEGFA-214ENST00000493786 RIC1Q4ADV7 1423 aa9.54□□□□□ -0.88
VEGFA-214ENST00000493786 AFDNP55196 1824 aaKnown RBP9.54□□□□□ -0.88
VEGFA-214ENST00000493786 TGFB2P61812 414 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 CCDC152Q4G0S7 254 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 SLC10A5Q5PT55 438 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 C2CD5Q86YS7 1000 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-214ENST00000493786 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 UTYO14607 1347 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 LRP5O75197 1615 aa9.53□□□□□ -0.88
VEGFA-214ENST00000493786 GNAI2P04899 355 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 NEFLP07196 543 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 NBPF7P0C2Y1 421 aaPredicted RBP9.52□□□□□ -0.89
VEGFA-214ENST00000493786 NPR1P16066 1061 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 CTSWP56202 376 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 DDX46Q7L014 1031 aaKnown RBP9.52□□□□□ -0.89
VEGFA-214ENST00000493786 ZNF622Q969S3 477 aaKnown RBP eCLIP9.52□□□□□ -0.894e-33■□□□□ 9.1
VEGFA-214ENST00000493786 MASTLQ96GX5 879 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
VEGFA-214ENST00000493786 SUCLG2Q96I99 432 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 MEIS3Q99687 375 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 PLA2G12BQ9BX93 195 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 NRXN2Q9P2S2 1712 aa9.52□□□□□ -0.89
VEGFA-214ENST00000493786 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-214ENST00000493786 CASP7P55210 303 aa9.51□□□□□ -0.89
VEGFA-214ENST00000493786 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
VEGFA-214ENST00000493786 TMX4Q9H1E5 349 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-214ENST00000493786 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
VEGFA-214ENST00000493786 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 SRGNP10124 158 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 DPEP1P16444 411 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CHRNA5P30532 468 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 ALDH1B1P30837 517 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 IFIT5Q13325 482 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms