RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
SGIP1-213ENST00000493564 NPR1P16066 1061 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
SGIP1-213ENST00000493564 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 G2E3Q7L622 706 aa12.16□□□□□ -0.46
SGIP1-213ENST00000493564 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
SGIP1-213ENST00000493564 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
SGIP1-213ENST00000493564 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
SGIP1-213ENST00000493564 MYD88Q99836 296 aa12.15□□□□□ -0.46
SGIP1-213ENST00000493564 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
SGIP1-213ENST00000493564 PRELPP51888 382 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
SGIP1-213ENST00000493564 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
SGIP1-213ENST00000493564 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 NFKBIEO00221 500 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 CHMP4AQ9BY43 222 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
SGIP1-213ENST00000493564 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
SGIP1-213ENST00000493564 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 ARFGEF1Q9Y6D6 1849 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
SGIP1-213ENST00000493564 CRY2Q49AN0 593 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 C7orf43Q8WVR3 580 aa12.12□□□□□ -0.47
SGIP1-213ENST00000493564 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
SGIP1-213ENST00000493564 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
SGIP1-213ENST00000493564 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
SGIP1-213ENST00000493564 GPBP1L1Q9HC44 474 aaPredicted RBP12.11□□□□□ -0.47
SGIP1-213ENST00000493564 DLEC1Q9Y238 1755 aa12.1□□□□□ -0.47
SGIP1-213ENST00000493564 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
SGIP1-213ENST00000493564 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
SGIP1-213ENST00000493564 LMNB1P20700 586 aa12.1□□□□□ -0.47
SGIP1-213ENST00000493564 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
SGIP1-213ENST00000493564 FLIIQ13045 1269 aa12.1□□□□□ -0.47
SGIP1-213ENST00000493564 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
SGIP1-213ENST00000493564 ADCY9O60503 1353 aa12.09□□□□□ -0.47
SGIP1-213ENST00000493564 CACNA1SQ13698 1873 aa12.09□□□□□ -0.47
SGIP1-213ENST00000493564 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
SGIP1-213ENST00000493564 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
SGIP1-213ENST00000493564 CWF19L2Q2TBE0 894 aaKnown RBP12.09□□□□□ -0.47
SGIP1-213ENST00000493564 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
SGIP1-213ENST00000493564 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
SGIP1-213ENST00000493564 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
SGIP1-213ENST00000493564 E9PSI1 815 aa12.08□□□□□ -0.48
SGIP1-213ENST00000493564 IRS4O14654 1257 aaPredicted RBP12.08□□□□□ -0.48
SGIP1-213ENST00000493564 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
SGIP1-213ENST00000493564 DDX46Q7L014 1031 aaKnown RBP12.08□□□□□ -0.48
SGIP1-213ENST00000493564 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
SGIP1-213ENST00000493564 CCDC191Q8NCU4 936 aa12.08□□□□□ -0.48
SGIP1-213ENST00000493564 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
SGIP1-213ENST00000493564 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
SGIP1-213ENST00000493564 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
SGIP1-213ENST00000493564 ABCC4O15439 1325 aa12.08□□□□□ -0.48
SGIP1-213ENST00000493564 F6X3S4 739 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
SGIP1-213ENST00000493564 SBF1O95248 1867 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 SOGA3Q5TF21 947 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
SGIP1-213ENST00000493564 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
SGIP1-213ENST00000493564 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
SGIP1-213ENST00000493564 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
SGIP1-213ENST00000493564 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
SGIP1-213ENST00000493564 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
SGIP1-213ENST00000493564 RIC1Q4ADV7 1423 aa12.05□□□□□ -0.48
SGIP1-213ENST00000493564 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
SGIP1-213ENST00000493564 BBOX1O75936 387 aa12.05□□□□□ -0.48
SGIP1-213ENST00000493564 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
SGIP1-213ENST00000493564 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
SGIP1-213ENST00000493564 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
SGIP1-213ENST00000493564 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
SGIP1-213ENST00000493564 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
SGIP1-213ENST00000493564 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
SGIP1-213ENST00000493564 KIF3CO14782 793 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 GRAPQ13588 217 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
SGIP1-213ENST00000493564 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
SGIP1-213ENST00000493564 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
SGIP1-213ENST00000493564 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 ATP6V0A2Q9Y487 856 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 TAF1P21675 1872 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
SGIP1-213ENST00000493564 PDE8AO60658 829 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms