RNA–Protein interactions for RNA: ENST00000493107.5

SEC22C-216, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 827 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-216ENST00000493107 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
SEC22C-216ENST00000493107 MYH14Q7Z406 1995 aaKnown RBP11.77□□□□□ -0.53
SEC22C-216ENST00000493107 LY75O60449 1722 aa11.77□□□□□ -0.53
SEC22C-216ENST00000493107 HSP90AB3PQ58FF7 597 aa11.76□□□□□ -0.53
SEC22C-216ENST00000493107 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
SEC22C-216ENST00000493107 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
SEC22C-216ENST00000493107 ARFGEF2Q9Y6D5 1785 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 RGL2O15211 777 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 APBA3O96018 575 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
SEC22C-216ENST00000493107 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
SEC22C-216ENST00000493107 GPTP24298 496 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 SUSD4Q5VX71 490 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
SEC22C-216ENST00000493107 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
SEC22C-216ENST00000493107 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 NARFQ9UHQ1 456 aa11.75□□□□□ -0.53
SEC22C-216ENST00000493107 GNPATO15228 680 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 HMMRO75330 724 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 ARXQ96QS3 562 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
SEC22C-216ENST00000493107 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
SEC22C-216ENST00000493107 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
SEC22C-216ENST00000493107 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
SEC22C-216ENST00000493107 CSF1RP07333 972 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 RGS3P49796 1198 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
SEC22C-216ENST00000493107 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
SEC22C-216ENST00000493107 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
SEC22C-216ENST00000493107 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
SEC22C-216ENST00000493107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
SEC22C-216ENST00000493107 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
SEC22C-216ENST00000493107 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
SEC22C-216ENST00000493107 NTSR2O95665 410 aa11.72□□□□□ -0.53
SEC22C-216ENST00000493107 PTPN12Q05209 780 aaKnown RBP11.72□□□□□ -0.53
SEC22C-216ENST00000493107 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
SEC22C-216ENST00000493107 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
SEC22C-216ENST00000493107 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
SEC22C-216ENST00000493107 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
SEC22C-216ENST00000493107 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
SEC22C-216ENST00000493107 TRAPPC3LQ5T215 181 aa11.71□□□□□ -0.53
SEC22C-216ENST00000493107 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
SEC22C-216ENST00000493107 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
SEC22C-216ENST00000493107 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
SEC22C-216ENST00000493107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
SEC22C-216ENST00000493107 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
SEC22C-216ENST00000493107 SASH1O94885 1247 aa11.7□□□□□ -0.54
SEC22C-216ENST00000493107 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
SEC22C-216ENST00000493107 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
SEC22C-216ENST00000493107 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
SEC22C-216ENST00000493107 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
SEC22C-216ENST00000493107 AK7Q96M32 723 aa11.7□□□□□ -0.54
SEC22C-216ENST00000493107 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
SEC22C-216ENST00000493107 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
SEC22C-216ENST00000493107 KAT6BQ8WYB5 2073 aa11.69□□□□□ -0.54
SEC22C-216ENST00000493107 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
SEC22C-216ENST00000493107 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
SEC22C-216ENST00000493107 PHF14O94880 888 aa11.69□□□□□ -0.54
SEC22C-216ENST00000493107 SSFA2P28290 1259 aa11.69□□□□□ -0.54
SEC22C-216ENST00000493107 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
SEC22C-216ENST00000493107 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
SEC22C-216ENST00000493107 RHPN1Q8TCX5 695 aa11.69□□□□□ -0.54
SEC22C-216ENST00000493107 UTP14AQ9BVJ6 771 aaKnown RBP11.69□□□□□ -0.54
SEC22C-216ENST00000493107 GYS1P13807 737 aa11.68□□□□□ -0.54
SEC22C-216ENST00000493107 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
SEC22C-216ENST00000493107 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
SEC22C-216ENST00000493107 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
SEC22C-216ENST00000493107 TNS1Q9HBL0 1735 aaKnown RBP11.68□□□□□ -0.54
SEC22C-216ENST00000493107 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 APBB1O00213 710 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 PDE8AO60658 829 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 ZPR1O75312 459 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-216ENST00000493107 TM4SF1P30408 202 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 RFC4P35249 363 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 CTSWP56202 376 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 NFIXQ14938 502 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 C8orf34Q49A92 452 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-216ENST00000493107 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 ZNF594Q96JF6 807 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-216ENST00000493107 LRRCC1Q9C099 1032 aa11.67□□□□□ -0.54
SEC22C-216ENST00000493107 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-216ENST00000493107 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
SEC22C-216ENST00000493107 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
SEC22C-216ENST00000493107 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
SEC22C-216ENST00000493107 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
SEC22C-216ENST00000493107 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms