RNA–Protein interactions for RNA: ENST00000493060.5

NVL-222, Transcript of nuclear VCP-like, human

TSL 2

Gene NVL, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-222	ENST00000493060	SOS1	Q07889	1333 aa	Predicted RBP	11.58	□□□□□ -0.56
NVL-222	ENST00000493060	COL15A1	P39059	1388 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	CCER2	I3L3R5	266 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	POLRMT	O00411	1230 aa	Known RBP	11.57	□□□□□ -0.56
NVL-222	ENST00000493060	TOMM70	O94826	608 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	CHRNA5	P30532	468 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	PPP4R3B	Q5MIZ7	849 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	C9orf131	Q5VYM1	1079 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	SLC52A2	Q9HAB3	445 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	LGR6	Q9HBX8	967 aa		11.57	□□□□□ -0.56
NVL-222	ENST00000493060	LAMB4	A4D0S4	1761 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	TM4SF1	P30408	202 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	APLP1	P51693	650 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	AKAP4	Q5JQC9	854 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	PIM2	Q9P1W9	311 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	KNSTRN	Q9Y448	316 aa		11.56	□□□□□ -0.56
NVL-222	ENST00000493060	CARMIL3	Q8ND23	1372 aa		11.55	□□□□□ -0.56
NVL-222	ENST00000493060	CYP19A1	P11511	503 aa	Predicted RBP	11.55	□□□□□ -0.56
NVL-222	ENST00000493060	SLC39A6	Q13433	755 aa		11.55	□□□□□ -0.56
NVL-222	ENST00000493060	DALRD3	Q5D0E6	543 aa	Known RBP	11.55	□□□□□ -0.56
NVL-222	ENST00000493060	USPL1	Q5W0Q7	1092 aa		11.55	□□□□□ -0.56
NVL-222	ENST00000493060	DNAJC5G	Q8N7S2	189 aa		11.55	□□□□□ -0.56
NVL-222	ENST00000493060	KIF7	Q2M1P5	1343 aa		11.55	□□□□□ -0.56
NVL-222	ENST00000493060	RNMT	O43148	476 aa	Known RBP	11.54	□□□□□ -0.56
NVL-222	ENST00000493060	HMOX1	P09601	288 aa		11.54	□□□□□ -0.56
NVL-222	ENST00000493060	BCL2L12	Q9HB09	334 aa		11.54	□□□□□ -0.56
NVL-222	ENST00000493060	ZBTB1	Q9Y2K1	713 aa		11.54	□□□□□ -0.56
NVL-222	ENST00000493060	NUP98	P52948	1817 aa		11.53	□□□□□ -0.56
NVL-222	ENST00000493060	NFIX	Q14938	502 aa		11.53	□□□□□ -0.56
NVL-222	ENST00000493060	RBM46	Q8TBY0	533 aa	Known RBP	11.53	□□□□□ -0.56
NVL-222	ENST00000493060	KCNK17	Q96T54	332 aa		11.53	□□□□□ -0.56
NVL-222	ENST00000493060	RNF181	Q9P0P0	153 aa		11.53	□□□□□ -0.56
NVL-222	ENST00000493060	ZPR1	O75312	459 aa		11.52	□□□□□ -0.57
NVL-222	ENST00000493060	PRELP	P51888	382 aa		11.52	□□□□□ -0.57
NVL-222	ENST00000493060	RASSF7	Q02833	373 aa		11.52	□□□□□ -0.57
NVL-222	ENST00000493060	MTHFSD	Q2M296	383 aa	Known RBP	11.52	□□□□□ -0.57
NVL-222	ENST00000493060	NARF	Q9UHQ1	456 aa		11.52	□□□□□ -0.57
NVL-222	ENST00000493060	SCN4A	P35499	1836 aa		11.51	□□□□□ -0.57
NVL-222	ENST00000493060	PER1	O15534	1290 aa	Predicted RBP	11.51	□□□□□ -0.57
NVL-222	ENST00000493060	HTRA3	P83110	453 aa		11.51	□□□□□ -0.57
NVL-222	ENST00000493060	KDM2B	Q8NHM5	1336 aa		11.51	□□□□□ -0.57
NVL-222	ENST00000493060	KDM3B	Q7LBC6	1761 aa		11.51	□□□□□ -0.57
NVL-222	ENST00000493060	TBC1D12	O60347	775 aa		11.5	□□□□□ -0.57
NVL-222	ENST00000493060	VSIG10	Q8N0Z9	540 aa		11.5	□□□□□ -0.57
NVL-222	ENST00000493060	KCTD12	Q96CX2	325 aa	Known RBP	11.5	□□□□□ -0.57
NVL-222	ENST00000493060	VPS9D1	Q9Y2B5	631 aa		11.5	□□□□□ -0.57
NVL-222	ENST00000493060	SERPINB2	P05120	415 aa		11.49	□□□□□ -0.57
NVL-222	ENST00000493060	RRAGC	Q9HB90	399 aa		11.49	□□□□□ -0.57
NVL-222	ENST00000493060	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.49	□□□□□ -0.57
NVL-222	ENST00000493060	DIAPH1	O60610	1272 aa	Known RBP	11.48	□□□□□ -0.57
NVL-222	ENST00000493060	CANX	P27824	592 aa	Known RBP	11.48	□□□□□ -0.57
NVL-222	ENST00000493060	FSTL1	Q12841	308 aa		11.48	□□□□□ -0.57
NVL-222	ENST00000493060	PPP1R15B	Q5SWA1	713 aa		11.48	□□□□□ -0.57
NVL-222	ENST00000493060	HEG1	Q9ULI3	1381 aa		11.48	□□□□□ -0.57
NVL-222	ENST00000493060	NPC1L1	Q9UHC9	1359 aa		11.47	□□□□□ -0.57
NVL-222	ENST00000493060	NFKBIE	O00221	500 aa		11.47	□□□□□ -0.57
NVL-222	ENST00000493060	EIF5	P55010	431 aa	Known RBP	11.47	□□□□□ -0.57
NVL-222	ENST00000493060	CC2D1B	Q5T0F9	858 aa	Known RBP	11.47	□□□□□ -0.57
NVL-222	ENST00000493060	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.47	□□□□□ -0.57
NVL-222	ENST00000493060	JMY	Q8N9B5	988 aa		11.47	□□□□□ -0.57
NVL-222	ENST00000493060	KLRG1	Q96E93	195 aa		11.47	□□□□□ -0.57
NVL-222	ENST00000493060	ZNF496	Q96IT1	587 aa	Predicted RBP	11.47	□□□□□ -0.57
NVL-222	ENST00000493060	YTHDC1	Q96MU7	727 aa	Known RBP	11.47	□□□□□ -0.57
NVL-222	ENST00000493060	ADAMTSL1	Q8N6G6	1762 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	CEMIP	Q8WUJ3	1361 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	LMNB1	P20700	586 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	FOSB	P53539	338 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	C2CD5	Q86YS7	1000 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	ZNF454	Q8N9F8	522 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	IL17RE	Q8NFR9	667 aa		11.46	□□□□□ -0.57
NVL-222	ENST00000493060	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.45	□□□□□ -0.58
NVL-222	ENST00000493060	TBC1D9B	Q66K14	1250 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	ZNF790	Q6PG37	636 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	BICDL1	Q6ZP65	573 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	TTLL6	Q8N841	843 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	LAMB2	P55268	1798 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	ANKRD36C	Q5JPF3	1778 aa		11.45	□□□□□ -0.58
NVL-222	ENST00000493060	GLTPD2	A6NH11	291 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060		H0YIN7	160 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060	PRR5L	Q6MZQ0	368 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060	TTC5	Q8N0Z6	440 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060	SMC1B	Q8NDV3	1235 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060	SLC4A5	Q9BY07	1137 aa		11.44	□□□□□ -0.58
NVL-222	ENST00000493060		A0A087WZG4	1122 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	GNAT3	A8MTJ3	354 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	POTEC	B2RU33	542 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	STARD3NL	O95772	234 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	TEF	Q10587	303 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	CCDC24	Q8N4L8	307 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	GAS2L2	Q8NHY3	880 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.43	□□□□□ -0.58
NVL-222	ENST00000493060	TBC1D2B	Q9UPU7	963 aa		11.43	□□□□□ -0.58
NVL-222	ENST00000493060	TRPM7	Q96QT4	1865 aa		11.42	□□□□□ -0.58
NVL-222	ENST00000493060	U2SURP	O15042	1029 aa	Known RBP	11.42	□□□□□ -0.58
NVL-222	ENST00000493060	KCNQ3	O43525	872 aa		11.42	□□□□□ -0.58
NVL-222	ENST00000493060	CAMTA2	O94983	1202 aa		11.42	□□□□□ -0.58
NVL-222	ENST00000493060	IL6ST	P40189	918 aa	Predicted RBP	11.42	□□□□□ -0.58
NVL-222	ENST00000493060	PHACTR3	Q96KR7	559 aa		11.42	□□□□□ -0.58
NVL-222	ENST00000493060	BRIP1	Q9BX63	1249 aa		11.42	□□□□□ -0.58
NVL-222	ENST00000493060	GTPBP6	O43824	516 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms