RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 FAM198AQ9UFP1 575 aa5.12□□□□□ -1.59
BRCA1-220ENST00000492859 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
BRCA1-220ENST00000492859 MRPS23Q9Y3D9 190 aaKnown RBP5.12□□□□□ -1.59
BRCA1-220ENST00000492859 CHMP3Q9Y3E7 222 aa5.12□□□□□ -1.59
BRCA1-220ENST00000492859 PRKAB1Q9Y478 270 aa5.12□□□□□ -1.59
BRCA1-220ENST00000492859 ZCCHC6Q5VYS8 1495 aaKnown RBP5.12□□□□□ -1.59
BRCA1-220ENST00000492859 RAD54L2Q9Y4B4 1467 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 GOLGA6L6A8MZA4 724 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 RPN1P04843 607 aaKnown RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 FOSL1P15407 271 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 NOS2P35228 1153 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 SCNN1AP37088 669 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 CASP2P42575 452 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 PTPN5P54829 565 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 GPSM2P81274 684 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 FANCCQ00597 558 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 EN1Q05925 392 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 TAF11Q15544 211 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 Q3C1V9 767 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 MYSM1Q5VVJ2 828 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 KLHL10Q6JEL2 608 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 CCDC73Q6ZRK6 1079 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 DZIP3Q86Y13 1208 aaKnown RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 MRFAP1L1Q96HT8 127 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 CCDC94Q9BW85 323 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 PDGFDQ9GZP0 370 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 NBPF3Q9H094 633 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 DNAJC25Q9H1X3 360 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 SEPT9Q9UHD8 586 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 PPP2R3BQ9Y5P8 575 aa5.11□□□□□ -1.59
BRCA1-220ENST00000492859 MAFBQ9Y5Q3 323 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-220ENST00000492859 A0A1W2PRQ8 180 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 ERICH4A6NGS2 130 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 LILRB3O75022 631 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 OSBPP22059 807 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 PAX7P23759 505 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 CCT2P78371 535 aaKnown RBP5.1□□□□□ -1.59
BRCA1-220ENST00000492859 MDM2Q00987 491 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-220ENST00000492859 DCTN1Q14203 1278 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 HSP90B2PQ58FF3 399 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 C16orf87Q6PH81 154 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 PODNQ7Z5L7 613 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 LCA5Q86VQ0 697 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 TMEM87AQ8NBN3 555 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 ATRIPQ8WXE1 791 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 KCNH8Q96L42 1107 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 FMNL2Q96PY5 1086 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 SLC4A5Q9BY07 1137 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 ALG2Q9H553 416 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 LGR6Q9HBX8 967 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 KIAA1468Q9P260 1216 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 SUN2Q9UH99 717 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 EVLQ9UI08 416 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-220ENST00000492859 RABGAP1Q9Y3P9 1069 aa5.1□□□□□ -1.59
BRCA1-220ENST00000492859 NUTM2FA1L443 756 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 K7ELQ4 463 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MPHOSPH10O00566 681 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MAP3K7O43318 606 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 TSPAN6O43657 245 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 KIF1CO43896 1103 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 LZTS3O60299 673 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MYL1P05976 194 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MYL3P08590 195 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 PIK3CAP42336 1068 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 TRPC1P48995 793 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 ARID5AQ03989 594 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 KIAA2012Q0VF49 1180 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 ELOAQ14241 798 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 PPP2R5AQ15172 486 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 LRRC41Q15345 812 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 NFE2Q16621 373 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 DNAJC21Q5F1R6 531 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 ACBD5Q5T8D3 534 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 UTP14CQ5TAP6 766 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 RC3H1Q5TC82 1133 aaKnown RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MFSD4BQ5TF39 518 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MYO1HQ8N1T3 1032 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 PGBD3Q8N328 593 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 JARID2Q92833 1246 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-220ENST00000492859 CENPTQ96BT3 561 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 CCDC34Q96HJ3 373 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 TMEM87BQ96K49 555 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 BEGAINQ9BUH8 593 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 TSKSQ9UJT2 592 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 MAFFQ9ULX9 164 aa5.09□□□□□ -1.59
BRCA1-220ENST00000492859 SPDYE16A6NNV3 312 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 CHL1O00533 1208 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 NBPF7P0C2Y1 421 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 HOXC13P31276 330 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 CLK2P49760 499 aaKnown RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 ZNF131P52739 623 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 GEMIN4P57678 1058 aaKnown RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 GNL2Q13823 731 aaKnown RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 SLC4A8Q2Y0W8 1093 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 GRAMD1BQ3KR37 738 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 EAPPQ56P03 285 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-220ENST00000492859 ALKBH2Q6NS38 261 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 ERAP2Q6P179 960 aa5.08□□□□□ -1.6
BRCA1-220ENST00000492859 SMAP1Q8IYB5 467 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms