RNA–Protein interactions for RNA: ENST00000492809.5

PCBP4-215, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-215ENST00000492809 ALDH1L1O75891 902 aa17.68■□□□□ 0.42
PCBP4-215ENST00000492809 MAP4K4O95819 1239 aaPredicted RBP17.68■□□□□ 0.42
PCBP4-215ENST00000492809 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
PCBP4-215ENST00000492809 SPC24Q8NBT2 197 aa17.68■□□□□ 0.42
PCBP4-215ENST00000492809 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
PCBP4-215ENST00000492809 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
PCBP4-215ENST00000492809 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
PCBP4-215ENST00000492809 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 TTC14Q96N46 770 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 NPHP4O75161 1426 aaPredicted RBP17.67■□□□□ 0.42
PCBP4-215ENST00000492809 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 RAD50Q92878 1312 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 FGD1P98174 961 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 NCBP1Q09161 790 aaKnown RBP17.67■□□□□ 0.42
PCBP4-215ENST00000492809 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
PCBP4-215ENST00000492809 SMC3Q9UQE7 1217 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 ADAMTSL3P82987 1691 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
PCBP4-215ENST00000492809 TPRNQ4KMQ1 711 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
PCBP4-215ENST00000492809 SMTNL1A8MU46 457 aa17.65■□□□□ 0.42
PCBP4-215ENST00000492809 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
PCBP4-215ENST00000492809 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
PCBP4-215ENST00000492809 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
PCBP4-215ENST00000492809 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
PCBP4-215ENST00000492809 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
PCBP4-215ENST00000492809 KIF1AQ12756 1690 aa17.64■□□□□ 0.41
PCBP4-215ENST00000492809 AK2P54819 239 aa17.64■□□□□ 0.41
PCBP4-215ENST00000492809 GLRX3O76003 335 aaKnown RBP17.64■□□□□ 0.41
PCBP4-215ENST00000492809 PTGS1P23219 599 aa17.64■□□□□ 0.41
PCBP4-215ENST00000492809 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
PCBP4-215ENST00000492809 RUFY3Q7L099 469 aa17.63■□□□□ 0.41
PCBP4-215ENST00000492809 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
PCBP4-215ENST00000492809 CGNQ9P2M7 1197 aaKnown RBP17.63■□□□□ 0.41
PCBP4-215ENST00000492809 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
PCBP4-215ENST00000492809 DNM1Q05193 864 aaKnown RBP17.63■□□□□ 0.41
PCBP4-215ENST00000492809 ZNF771Q7L3S4 317 aaPredicted RBP17.63■□□□□ 0.41
PCBP4-215ENST00000492809 HYPKQ9NX55 129 aa17.63■□□□□ 0.41
PCBP4-215ENST00000492809 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
PCBP4-215ENST00000492809 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
PCBP4-215ENST00000492809 PAXBP1Q9Y5B6 917 aa17.62■□□□□ 0.41
PCBP4-215ENST00000492809 MST1RQ04912 1400 aa17.62■□□□□ 0.41
PCBP4-215ENST00000492809 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
PCBP4-215ENST00000492809 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
PCBP4-215ENST00000492809 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
PCBP4-215ENST00000492809 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
PCBP4-215ENST00000492809 IGSF3O75054 1194 aa17.61■□□□□ 0.41
PCBP4-215ENST00000492809 UTYO14607 1347 aa17.61■□□□□ 0.41
PCBP4-215ENST00000492809 SCN11AQ9UI33 1791 aa17.61■□□□□ 0.41
PCBP4-215ENST00000492809 MORC2Q9Y6X9 1032 aaPredicted RBP17.61■□□□□ 0.41
PCBP4-215ENST00000492809 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
PCBP4-215ENST00000492809 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
PCBP4-215ENST00000492809 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 CCDC186Q7Z3E2 898 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 KRT28Q7Z3Y7 464 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 ECHDC1Q9NTX5 307 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 C5P01031 1676 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
PCBP4-215ENST00000492809 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
PCBP4-215ENST00000492809 DDX21Q9NR30 783 aaKnown RBP eCLIP17.6■□□□□ 0.41
PCBP4-215ENST00000492809 GJB2P29033 226 aa17.59■□□□□ 0.41
PCBP4-215ENST00000492809 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
PCBP4-215ENST00000492809 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
PCBP4-215ENST00000492809 TNNT1P13805 278 aa17.59■□□□□ 0.41
PCBP4-215ENST00000492809 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.59■□□□□ 0.41
PCBP4-215ENST00000492809 RUFY2Q8WXA3 655 aa17.59■□□□□ 0.41
PCBP4-215ENST00000492809 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
PCBP4-215ENST00000492809 GRM8O00222 908 aa17.58■□□□□ 0.41
PCBP4-215ENST00000492809 TYRO3Q06418 890 aa17.58■□□□□ 0.41
PCBP4-215ENST00000492809 PDIA6Q15084 440 aa17.58■□□□□ 0.41
PCBP4-215ENST00000492809 GPATCH3Q96I76 525 aa17.58■□□□□ 0.41
PCBP4-215ENST00000492809 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.41
PCBP4-215ENST00000492809 C16orf45Q96MC5 204 aaPredicted RBP17.58■□□□□ 0.41
PCBP4-215ENST00000492809 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
PCBP4-215ENST00000492809 SLFN14P0C7P3 912 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 KAZALD1Q96I82 304 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 LARP6Q9BRS8 491 aaKnown RBP17.58■□□□□ 0.4
PCBP4-215ENST00000492809 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
PCBP4-215ENST00000492809 IFIT2P09913 472 aaKnown RBP17.57■□□□□ 0.4
PCBP4-215ENST00000492809 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 ERBB3P21860 1342 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
PCBP4-215ENST00000492809 LRMPQ12912 555 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 ZSCAN25Q6NSZ9 544 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 LUZP1Q86V48 1076 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 PLA2G4DQ86XP0 818 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
PCBP4-215ENST00000492809 ELP1O95163 1332 aa17.57■□□□□ 0.4
PCBP4-215ENST00000492809 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
PCBP4-215ENST00000492809 DRC7Q8IY82 874 aa17.56■□□□□ 0.4
PCBP4-215ENST00000492809 KCNB2Q92953 911 aa17.56■□□□□ 0.4
PCBP4-215ENST00000492809 LARGE1O95461 756 aa17.56■□□□□ 0.4
PCBP4-215ENST00000492809 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
PCBP4-215ENST00000492809 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms