RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.08
PRAME-213ENST00000492657 BRD1O95696 1058 aa15.52■□□□□ 0.07
PRAME-213ENST00000492657 AK2P54819 239 aa15.52■□□□□ 0.07
PRAME-213ENST00000492657 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.07
PRAME-213ENST00000492657 EDC3Q96F86 508 aaKnown RBP15.52■□□□□ 0.07
PRAME-213ENST00000492657 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 NBPF14Q5TI25 921 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
PRAME-213ENST00000492657 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 EVI5LQ96CN4 794 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 TTC14Q96N46 770 aa15.51■□□□□ 0.07
PRAME-213ENST00000492657 EPB41L2O43491 1005 aaKnown RBP15.51■□□□□ 0.07
PRAME-213ENST00000492657 INTS4Q96HW7 963 aaKnown RBP15.51■□□□□ 0.07
PRAME-213ENST00000492657 CASTP20810 708 aaKnown RBP15.5■□□□□ 0.07
PRAME-213ENST00000492657 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
PRAME-213ENST00000492657 RUFY3Q7L099 469 aa15.5■□□□□ 0.07
PRAME-213ENST00000492657 NDUFB9Q9Y6M9 179 aa15.5■□□□□ 0.07
PRAME-213ENST00000492657 A0A087WZG4 1122 aa15.5■□□□□ 0.07
PRAME-213ENST00000492657 COL9A3Q14050 684 aaPredicted RBP15.5■□□□□ 0.07
PRAME-213ENST00000492657 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
PRAME-213ENST00000492657 CPDO75976 1380 aa15.5■□□□□ 0.07
PRAME-213ENST00000492657 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
PRAME-213ENST00000492657 RFX5P48382 616 aaPredicted RBP15.49■□□□□ 0.07
PRAME-213ENST00000492657 TTLL7Q6ZT98 887 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
PRAME-213ENST00000492657 A1BGP04217 495 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
PRAME-213ENST00000492657 LARGE1O95461 756 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 TFCP2Q12800 502 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 ZSCAN23Q3MJ62 389 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
PRAME-213ENST00000492657 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
PRAME-213ENST00000492657 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
PRAME-213ENST00000492657 A0A0D9SFI3 127 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
PRAME-213ENST00000492657 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 MRC1P22897 1456 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 CHGBP05060 677 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 FSD1Q9BTV5 496 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 GDPD2Q9HCC8 539 aa15.48■□□□□ 0.07
PRAME-213ENST00000492657 SLAIN2Q9P270 581 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 PKD1L3Q7Z443 1732 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 COPRSQ9NQ92 184 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 DBNLQ9UJU6 430 aaKnown RBP15.47■□□□□ 0.07
PRAME-213ENST00000492657 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 RBM8AQ9Y5S9 174 aaKnown RBP15.47■□□□□ 0.07
PRAME-213ENST00000492657 TCHHQ07283 1943 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 CCDC171Q6TFL3 1326 aa15.47■□□□□ 0.07
PRAME-213ENST00000492657 CASP7P55210 303 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 NECTIN1Q15223 517 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 LMBR1LQ6UX01 489 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
PRAME-213ENST00000492657 KCNJ4P48050 445 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 TMEM63CQ9P1W3 806 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.07
PRAME-213ENST00000492657 AFDNP55196 1824 aaKnown RBP15.46■□□□□ 0.06
PRAME-213ENST00000492657 PDRG1Q9NUG6 133 aa15.45■□□□□ 0.06
PRAME-213ENST00000492657 RABL6Q3YEC7 729 aaPredicted RBP15.45■□□□□ 0.06
PRAME-213ENST00000492657 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
PRAME-213ENST00000492657 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
PRAME-213ENST00000492657 ZNF589Q86UQ0 364 aaPredicted RBP15.45■□□□□ 0.06
PRAME-213ENST00000492657 ZBTB3Q9H5J0 574 aa15.45■□□□□ 0.06
PRAME-213ENST00000492657 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
PRAME-213ENST00000492657 NASPP49321 788 aaPredicted RBP15.44■□□□□ 0.06
PRAME-213ENST00000492657 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 GLI3P10071 1580 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
PRAME-213ENST00000492657 ZNF445P59923 1031 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 CCDC83Q8IWF9 413 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 MAP4K1Q92918 833 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 PCDH11XQ9BZA7 1347 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 PCDH11YQ9BZA8 1340 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 ABCC6O95255 1503 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 GADD45BO75293 160 aaPredicted RBP15.44■□□□□ 0.06
PRAME-213ENST00000492657 KCNB2Q92953 911 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 ZSWIM6Q9HCJ5 1215 aa15.44■□□□□ 0.06
PRAME-213ENST00000492657 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
PRAME-213ENST00000492657 ARFGEF2Q9Y6D5 1785 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
PRAME-213ENST00000492657 FOXO4P98177 505 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 SLC27A2O14975 620 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 IL2RBP14784 551 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 NECAB1Q8N987 351 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 RBSNQ9H1K0 784 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
PRAME-213ENST00000492657 H7C1W4 665 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
PRAME-213ENST00000492657 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 KAT6BQ8WYB5 2073 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 COL5A2P05997 1499 aaPredicted RBP15.42■□□□□ 0.06
PRAME-213ENST00000492657 WDR33Q9C0J8 1336 aaKnown RBP15.42■□□□□ 0.06
PRAME-213ENST00000492657 ERVV-2B6SEH9 535 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 SYT1P21579 422 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 EVA1CP58658 441 aa15.42■□□□□ 0.06
PRAME-213ENST00000492657 ST3GAL1Q11201 340 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms