RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 ERFEQ4G0M1 354 aa20.57■□□□□ 0.88
PKP4-214ENST00000492496 FANCIQ9NVI1 1328 aa20.56■□□□□ 0.88
PKP4-214ENST00000492496 UTP14AQ9BVJ6 771 aaKnown RBP20.56■□□□□ 0.88
PKP4-214ENST00000492496 CRY2Q49AN0 593 aa20.55■□□□□ 0.88
PKP4-214ENST00000492496 NLRP10Q86W26 655 aa20.55■□□□□ 0.88
PKP4-214ENST00000492496 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
PKP4-214ENST00000492496 PRPF40BQ6NWY9 871 aaKnown RBP20.54■□□□□ 0.88
PKP4-214ENST00000492496 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
PKP4-214ENST00000492496 PHAXQ9H814 394 aaKnown RBP20.54■□□□□ 0.88
PKP4-214ENST00000492496 SLC10A5Q5PT55 438 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 SOGA3Q5TF21 947 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 LAMB2P55268 1798 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
PKP4-214ENST00000492496 C21orf2O43822 256 aa20.52■□□□□ 0.88
PKP4-214ENST00000492496 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
PKP4-214ENST00000492496 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
PKP4-214ENST00000492496 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
PKP4-214ENST00000492496 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
PKP4-214ENST00000492496 DICER1Q9UPY3 1922 aaKnown RBP20.52■□□□□ 0.88
PKP4-214ENST00000492496 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
PKP4-214ENST00000492496 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
PKP4-214ENST00000492496 HOXA10P31260 410 aaPredicted RBP20.5■□□□□ 0.87
PKP4-214ENST00000492496 RASSF7Q02833 373 aa20.5■□□□□ 0.87
PKP4-214ENST00000492496 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
PKP4-214ENST00000492496 NLRP3Q96P20 1036 aa20.5■□□□□ 0.87
PKP4-214ENST00000492496 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
PKP4-214ENST00000492496 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
PKP4-214ENST00000492496 TRMT112Q9UI30 125 aaKnown RBP20.5■□□□□ 0.87
PKP4-214ENST00000492496 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
PKP4-214ENST00000492496 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
PKP4-214ENST00000492496 NFKBIEO00221 500 aa20.49■□□□□ 0.87
PKP4-214ENST00000492496 VAMP4O75379 141 aa20.49■□□□□ 0.87
PKP4-214ENST00000492496 LMNB1P20700 586 aa20.49■□□□□ 0.87
PKP4-214ENST00000492496 EXOSC9Q06265 439 aaKnown RBP20.49■□□□□ 0.87
PKP4-214ENST00000492496 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
PKP4-214ENST00000492496 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
PKP4-214ENST00000492496 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
PKP4-214ENST00000492496 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
PKP4-214ENST00000492496 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
PKP4-214ENST00000492496 ZC3H4Q9UPT8 1303 aaKnown RBP20.48■□□□□ 0.87
PKP4-214ENST00000492496 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
PKP4-214ENST00000492496 ATP5J2-PTCD1G3V325 749 aa20.47■□□□□ 0.87
PKP4-214ENST00000492496 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
PKP4-214ENST00000492496 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
PKP4-214ENST00000492496 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
PKP4-214ENST00000492496 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
PKP4-214ENST00000492496 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PKP4-214ENST00000492496 METTL22Q9BUU2 404 aaPredicted RBP20.46■□□□□ 0.87
PKP4-214ENST00000492496 PRELPP51888 382 aa20.45■□□□□ 0.86
PKP4-214ENST00000492496 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
PKP4-214ENST00000492496 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
PKP4-214ENST00000492496 MYD88Q99836 296 aa20.45■□□□□ 0.86
PKP4-214ENST00000492496 TAOK3Q9H2K8 898 aa20.45■□□□□ 0.86
PKP4-214ENST00000492496 HCLS1P14317 486 aaPredicted RBP20.44■□□□□ 0.86
PKP4-214ENST00000492496 CC2D2BQ6DHV5 1058 aa20.44■□□□□ 0.86
PKP4-214ENST00000492496 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
PKP4-214ENST00000492496 SYNE4Q8N205 404 aa20.44■□□□□ 0.86
PKP4-214ENST00000492496 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
PKP4-214ENST00000492496 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
PKP4-214ENST00000492496 E9PSI1 815 aa20.43■□□□□ 0.86
PKP4-214ENST00000492496 G2E3Q7L622 706 aa20.43■□□□□ 0.86
PKP4-214ENST00000492496 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
PKP4-214ENST00000492496 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
PKP4-214ENST00000492496 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
PKP4-214ENST00000492496 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
PKP4-214ENST00000492496 FLIIQ13045 1269 aa20.42■□□□□ 0.86
PKP4-214ENST00000492496 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
PKP4-214ENST00000492496 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
PKP4-214ENST00000492496 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
PKP4-214ENST00000492496 FKBP4Q02790 459 aaKnown RBP eCLIP20.41■□□□□ 0.86
PKP4-214ENST00000492496 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
PKP4-214ENST00000492496 MIER1Q8N108 512 aa20.41■□□□□ 0.86
PKP4-214ENST00000492496 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
PKP4-214ENST00000492496 TAF1P21675 1872 aa20.41■□□□□ 0.86
PKP4-214ENST00000492496 PPEF1O14829 653 aaPredicted RBP20.4■□□□□ 0.86
PKP4-214ENST00000492496 ABCC4O15439 1325 aa20.4■□□□□ 0.86
PKP4-214ENST00000492496 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
PKP4-214ENST00000492496 SLFN5Q08AF3 891 aa20.4■□□□□ 0.86
PKP4-214ENST00000492496 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
PKP4-214ENST00000492496 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
PKP4-214ENST00000492496 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.85
PKP4-214ENST00000492496 BBOX1O75936 387 aa20.39■□□□□ 0.85
PKP4-214ENST00000492496 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.85
PKP4-214ENST00000492496 SF3B3Q15393 1217 aaKnown RBP20.39■□□□□ 0.85
PKP4-214ENST00000492496 OLFM4Q6UX06 510 aa20.39■□□□□ 0.85
PKP4-214ENST00000492496 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
PKP4-214ENST00000492496 MYH3P11055 1940 aa20.39■□□□□ 0.85
PKP4-214ENST00000492496 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
PKP4-214ENST00000492496 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
PKP4-214ENST00000492496 PSMD1Q99460 953 aa20.38■□□□□ 0.85
PKP4-214ENST00000492496 GRAPQ13588 217 aa20.37■□□□□ 0.85
PKP4-214ENST00000492496 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
PKP4-214ENST00000492496 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
PKP4-214ENST00000492496 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
PKP4-214ENST00000492496 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
PKP4-214ENST00000492496 GLTPD2A6NH11 291 aa20.36■□□□□ 0.85
PKP4-214ENST00000492496 KIF3CO14782 793 aa20.36■□□□□ 0.85
PKP4-214ENST00000492496 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms