RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 HIP1O00291 1037 aa19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 ME3Q16798 604 aa19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 FAM184AQ8NB25 1140 aa19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 ERBB3P21860 1342 aa19.32■□□□□ 0.68
SEMA4D-220ENST00000492386 DTNBO60941 627 aa19.31■□□□□ 0.68
SEMA4D-220ENST00000492386 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
SEMA4D-220ENST00000492386 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
SEMA4D-220ENST00000492386 KDM6AO15550 1401 aaPredicted RBP19.31■□□□□ 0.68
SEMA4D-220ENST00000492386 FIBPO43427 364 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 NPHP4O75161 1426 aaPredicted RBP19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 A0A0D9SFI3 127 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 TERF1P54274 439 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 SLC39A6Q13433 755 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 UVSSAQ2YD98 709 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 KRT28Q7Z3Y7 464 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 SIL1Q9H173 461 aa19.3■□□□□ 0.68
SEMA4D-220ENST00000492386 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 SLC27A2O14975 620 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 TPCN1Q9ULQ1 816 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 RRP9O43818 475 aaKnown RBP19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 BOLA2Q9H3K6 86 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 SLC52A2Q9HAB3 445 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 KIF1AQ12756 1690 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 MST1RQ04912 1400 aa19.29■□□□□ 0.68
SEMA4D-220ENST00000492386 KCNJ4P48050 445 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 GCKRQ14397 625 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 ALS2Q96Q42 1657 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
SEMA4D-220ENST00000492386 JCADQ9P266 1359 aa19.27■□□□□ 0.68
SEMA4D-220ENST00000492386 MYL6BP14649 208 aa19.27■□□□□ 0.68
SEMA4D-220ENST00000492386 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
SEMA4D-220ENST00000492386 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
SEMA4D-220ENST00000492386 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
SEMA4D-220ENST00000492386 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.67
SEMA4D-220ENST00000492386 HSP90AA2PQ14568 343 aaPredicted RBP19.27■□□□□ 0.67
SEMA4D-220ENST00000492386 TPRNQ4KMQ1 711 aa19.27■□□□□ 0.67
SEMA4D-220ENST00000492386 METTL22Q9BUU2 404 aaPredicted RBP19.27■□□□□ 0.67
SEMA4D-220ENST00000492386 PSMA5P28066 241 aa19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 CSPP1Q1MSJ5 1256 aa19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 FUCA2Q9BTY2 467 aa19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 HCLS1P14317 486 aaPredicted RBP19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
SEMA4D-220ENST00000492386 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 PHKG2P15735 406 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 LRP10Q7Z4F1 713 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 MYD88Q99836 296 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 PTMAP06454 111 aaKnown RBP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 ALDH8A1Q9H2A2 487 aaPredicted RBP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 USP25Q9UHP3 1055 aa19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
SEMA4D-220ENST00000492386 RNF20Q5VTR2 975 aa19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 ZNF496Q96IT1 587 aaPredicted RBP19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 COPRSQ9NQ92 184 aa19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 MEGF6O75095 1541 aa19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 RPS6KB1P23443 525 aa19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 BLOC1S2Q6QNY1 142 aa19.24■□□□□ 0.67
SEMA4D-220ENST00000492386 RFX5P48382 616 aaPredicted RBP19.23■□□□□ 0.67
SEMA4D-220ENST00000492386 LARP1BQ659C4 914 aaKnown RBP19.23■□□□□ 0.67
SEMA4D-220ENST00000492386 NLRP2Q9NX02 1062 aa19.23■□□□□ 0.67
SEMA4D-220ENST00000492386 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
SEMA4D-220ENST00000492386 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 EDC3Q96F86 508 aaKnown RBP19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 COL18A1P39060 1754 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 TOB2Q14106 344 aaPredicted RBP19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 ANKRD1Q15327 319 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 ANKRD13DQ6ZTN6 518 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 CDC37L1Q7L3B6 337 aa19.22■□□□□ 0.67
SEMA4D-220ENST00000492386 TAF5LO75529 589 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 ADCY5O95622 1261 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 PDIA4P13667 645 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 TATP17735 454 aaPredicted RBP19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 ATP5JP18859 108 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 DBNLQ9UJU6 430 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 USP16Q9Y5T5 823 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 ABCC6O95255 1503 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 COL15A1P39059 1388 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms