RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, humanhuman

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-210ENST00000492314 COL4A5P29400 1685 aa12.32□□□□□ -0.44
PBX3-210ENST00000492314 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 RGS19P49795 217 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 MAP2K1Q02750 393 aaPredicted RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 EVX2Q03828 476 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 EAPPQ56P03 285 aaPredicted RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 MAP1SQ66K74 1059 aaPredicted RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 WDR33Q9C0J8 1336 aaKnown RBP12.31□□□□□ -0.44
PBX3-210ENST00000492314 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
PBX3-210ENST00000492314 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
PBX3-210ENST00000492314 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
PBX3-210ENST00000492314 NPHP1O15259 732 aa12.3□□□□□ -0.44
PBX3-210ENST00000492314 PIP4K2AP48426 406 aaPredicted RBP12.3□□□□□ -0.44
PBX3-210ENST00000492314 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
PBX3-210ENST00000492314 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
PBX3-210ENST00000492314 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
PBX3-210ENST00000492314 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
PBX3-210ENST00000492314 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
PBX3-210ENST00000492314 ALDH1B1P30837 517 aa12.29□□□□□ -0.44
PBX3-210ENST00000492314 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
PBX3-210ENST00000492314 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
PBX3-210ENST00000492314 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
PBX3-210ENST00000492314 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
PBX3-210ENST00000492314 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
PBX3-210ENST00000492314 HOXA10P31260 410 aaPredicted RBP12.28□□□□□ -0.44
PBX3-210ENST00000492314 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
PBX3-210ENST00000492314 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
PBX3-210ENST00000492314 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
PBX3-210ENST00000492314 SCNN1DP51172 638 aa12.27□□□□□ -0.45
PBX3-210ENST00000492314 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
PBX3-210ENST00000492314 CST9Q5W186 159 aa12.27□□□□□ -0.45
PBX3-210ENST00000492314 ABCC12Q96J65 1359 aa12.27□□□□□ -0.45
PBX3-210ENST00000492314 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
PBX3-210ENST00000492314 HLFQ16534 295 aa12.26□□□□□ -0.45
PBX3-210ENST00000492314 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
PBX3-210ENST00000492314 CAPNS2Q96L46 248 aa12.26□□□□□ -0.45
PBX3-210ENST00000492314 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
PBX3-210ENST00000492314 TRPM7Q96QT4 1865 aa12.25□□□□□ -0.45
PBX3-210ENST00000492314 EPS15P42566 896 aa12.25□□□□□ -0.45
PBX3-210ENST00000492314 FMR1Q06787 632 aaKnown RBP eCLIP12.25□□□□□ -0.45
PBX3-210ENST00000492314 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
PBX3-210ENST00000492314 ABT1Q9ULW3 272 aaKnown RBP12.25□□□□□ -0.45
PBX3-210ENST00000492314 ERVV-1B6SEH8 477 aa12.24□□□□□ -0.45
PBX3-210ENST00000492314 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
PBX3-210ENST00000492314 MAP2K2P36507 400 aa12.24□□□□□ -0.45
PBX3-210ENST00000492314 ECE1P42892 770 aa12.24□□□□□ -0.45
PBX3-210ENST00000492314 USP50Q70EL3 339 aaPredicted RBP12.24□□□□□ -0.45
PBX3-210ENST00000492314 TLL2Q9Y6L7 1015 aa12.24□□□□□ -0.45
PBX3-210ENST00000492314 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
PBX3-210ENST00000492314 MCM10Q7L590 875 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 GPR101Q96P66 508 aaPredicted RBP12.23□□□□□ -0.45
PBX3-210ENST00000492314 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 NYXQ9GZU5 481 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 PGAP2Q9UHJ9 254 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 NUP98P52948 1817 aa12.23□□□□□ -0.45
PBX3-210ENST00000492314 TRAF5O00463 557 aa12.22□□□□□ -0.45
PBX3-210ENST00000492314 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
PBX3-210ENST00000492314 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
PBX3-210ENST00000492314 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
PBX3-210ENST00000492314 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
PBX3-210ENST00000492314 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
PBX3-210ENST00000492314 VPS33BQ9H267 617 aa12.22□□□□□ -0.45
PBX3-210ENST00000492314 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 UBN2Q6ZU65 1347 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 SAPCD2Q86UD0 394 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
PBX3-210ENST00000492314 CA12O43570 354 aa12.2□□□□□ -0.46
PBX3-210ENST00000492314 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
PBX3-210ENST00000492314 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
PBX3-210ENST00000492314 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
PBX3-210ENST00000492314 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
PBX3-210ENST00000492314 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
PBX3-210ENST00000492314 ADARB2Q9NS39 739 aaKnown RBP12.2□□□□□ -0.46
PBX3-210ENST00000492314 CCDC85CA6NKD9 419 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 AOC2O75106 756 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 NTSR2O95665 410 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 U2AF1L5P0DN76 240 aaPredicted RBP12.19□□□□□ -0.46
PBX3-210ENST00000492314 GTF2E1P29083 439 aaPredicted RBP12.19□□□□□ -0.46
PBX3-210ENST00000492314 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
PBX3-210ENST00000492314 U2AF1Q01081 240 aaKnown RBP eCLIP12.19□□□□□ -0.46
PBX3-210ENST00000492314 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
PBX3-210ENST00000492314 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
PBX3-210ENST00000492314 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms