RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
TOM1-215ENST00000491987 ALDH1B1P30837 517 aa19.46■□□□□ 0.71
TOM1-215ENST00000491987 OLFM4Q6UX06 510 aa19.46■□□□□ 0.71
TOM1-215ENST00000491987 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
TOM1-215ENST00000491987 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
TOM1-215ENST00000491987 TOMM70O94826 608 aa19.45■□□□□ 0.7
TOM1-215ENST00000491987 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
TOM1-215ENST00000491987 NLRP10Q86W26 655 aa19.45■□□□□ 0.7
TOM1-215ENST00000491987 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
TOM1-215ENST00000491987 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
TOM1-215ENST00000491987 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
TOM1-215ENST00000491987 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
TOM1-215ENST00000491987 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
TOM1-215ENST00000491987 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
TOM1-215ENST00000491987 PLBD2Q8NHP8 589 aa19.43■□□□□ 0.7
TOM1-215ENST00000491987 HSPA6P17066 643 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 HOXA10P31260 410 aaPredicted RBP19.42■□□□□ 0.7
TOM1-215ENST00000491987 FKBP4Q02790 459 aaKnown RBP eCLIP19.42■□□□□ 0.7
TOM1-215ENST00000491987 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 RBM17Q96I25 401 aaKnown RBP19.42■□□□□ 0.7
TOM1-215ENST00000491987 NLRP3Q96P20 1036 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 DICER1Q9UPY3 1922 aaKnown RBP19.42■□□□□ 0.7
TOM1-215ENST00000491987 RNF123Q5XPI4 1314 aa19.42■□□□□ 0.7
TOM1-215ENST00000491987 SLC10A5Q5PT55 438 aa19.41■□□□□ 0.7
TOM1-215ENST00000491987 WWC1Q8IX03 1113 aa19.41■□□□□ 0.7
TOM1-215ENST00000491987 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
TOM1-215ENST00000491987 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
TOM1-215ENST00000491987 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
TOM1-215ENST00000491987 DPY19L2Q6NUT2 758 aa19.4■□□□□ 0.7
TOM1-215ENST00000491987 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
TOM1-215ENST00000491987 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
TOM1-215ENST00000491987 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
TOM1-215ENST00000491987 PHAXQ9H814 394 aaKnown RBP19.4■□□□□ 0.7
TOM1-215ENST00000491987 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
TOM1-215ENST00000491987 ATP5J2-PTCD1G3V325 749 aa19.39■□□□□ 0.69
TOM1-215ENST00000491987 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
TOM1-215ENST00000491987 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
TOM1-215ENST00000491987 SLC51AQ86UW1 340 aa19.39■□□□□ 0.69
TOM1-215ENST00000491987 SNED1Q8TER0 1413 aa19.39■□□□□ 0.69
TOM1-215ENST00000491987 PPEF1O14829 653 aaPredicted RBP19.38■□□□□ 0.69
TOM1-215ENST00000491987 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
TOM1-215ENST00000491987 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
TOM1-215ENST00000491987 TSPYL6Q8N831 410 aa19.38■□□□□ 0.69
TOM1-215ENST00000491987 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
TOM1-215ENST00000491987 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
TOM1-215ENST00000491987 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
TOM1-215ENST00000491987 LAMB2P55268 1798 aa19.37■□□□□ 0.69
TOM1-215ENST00000491987 WDR90Q96KV7 1748 aa19.37■□□□□ 0.69
TOM1-215ENST00000491987 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
TOM1-215ENST00000491987 ABCC4O15439 1325 aa19.36■□□□□ 0.69
TOM1-215ENST00000491987 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
TOM1-215ENST00000491987 CC2D2BQ6DHV5 1058 aa19.36■□□□□ 0.69
TOM1-215ENST00000491987 IL16Q14005 1332 aa19.35■□□□□ 0.69
TOM1-215ENST00000491987 POTECB2RU33 542 aa19.35■□□□□ 0.69
TOM1-215ENST00000491987 DDNO94850 711 aaPredicted RBP19.35■□□□□ 0.69
TOM1-215ENST00000491987 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
TOM1-215ENST00000491987 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
TOM1-215ENST00000491987 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
TOM1-215ENST00000491987 FAM89AQ96GI7 184 aa19.35■□□□□ 0.69
TOM1-215ENST00000491987 PSMD1Q99460 953 aa19.35■□□□□ 0.69
TOM1-215ENST00000491987 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
TOM1-215ENST00000491987 FSTL1Q12841 308 aa19.34■□□□□ 0.69
TOM1-215ENST00000491987 CHMP4AQ9BY43 222 aa19.34■□□□□ 0.69
TOM1-215ENST00000491987 ZNF541Q9H0D2 1346 aa19.33■□□□□ 0.69
TOM1-215ENST00000491987 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
TOM1-215ENST00000491987 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
TOM1-215ENST00000491987 DDX46Q7L014 1031 aaKnown RBP19.33■□□□□ 0.68
TOM1-215ENST00000491987 MYD88Q99836 296 aa19.33■□□□□ 0.68
TOM1-215ENST00000491987 TRIM28Q13263 835 aaKnown RBP19.32■□□□□ 0.68
TOM1-215ENST00000491987 SMC1BQ8NDV3 1235 aa19.32■□□□□ 0.68
TOM1-215ENST00000491987 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
TOM1-215ENST00000491987 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
TOM1-215ENST00000491987 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
TOM1-215ENST00000491987 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
TOM1-215ENST00000491987 APLP1P51693 650 aa19.31■□□□□ 0.68
TOM1-215ENST00000491987 GRIPAP1Q4V328 841 aa19.31■□□□□ 0.68
TOM1-215ENST00000491987 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
TOM1-215ENST00000491987 COL4A5P29400 1685 aa19.3■□□□□ 0.68
TOM1-215ENST00000491987 BBOX1O75936 387 aa19.3■□□□□ 0.68
TOM1-215ENST00000491987 GRAPQ13588 217 aa19.3■□□□□ 0.68
TOM1-215ENST00000491987 WDR63Q8IWG1 891 aa19.3■□□□□ 0.68
TOM1-215ENST00000491987 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
TOM1-215ENST00000491987 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
TOM1-215ENST00000491987 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
TOM1-215ENST00000491987 FZD9O00144 591 aa19.28■□□□□ 0.68
TOM1-215ENST00000491987 SP8Q8IXZ3 490 aa19.28■□□□□ 0.68
TOM1-215ENST00000491987 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
TOM1-215ENST00000491987 METTL22Q9BUU2 404 aaPredicted RBP19.28■□□□□ 0.68
TOM1-215ENST00000491987 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
TOM1-215ENST00000491987 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
TOM1-215ENST00000491987 G2E3Q7L622 706 aa19.27■□□□□ 0.68
TOM1-215ENST00000491987 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
TOM1-215ENST00000491987 CCDC191Q8NCU4 936 aa19.27■□□□□ 0.68
TOM1-215ENST00000491987 L3MBTL3Q96JM7 780 aaPredicted RBP19.27■□□□□ 0.68
TOM1-215ENST00000491987 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.68
TOM1-215ENST00000491987 TAF1P21675 1872 aa19.26■□□□□ 0.67
TOM1-215ENST00000491987 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
TOM1-215ENST00000491987 IQCA1LA6NCM1 817 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms