RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
SS18L1-204ENST00000491916 METTL22Q9BUU2 404 aaPredicted RBP19.5■□□□□ 0.71
SS18L1-204ENST00000491916 ARFGEF1Q9Y6D6 1849 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 H0YIN7 160 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 SLC10A5Q5PT55 438 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 C3orf67Q6ZVT6 689 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
SS18L1-204ENST00000491916 MAP3K2Q9Y2U5 619 aa19.49■□□□□ 0.71
SS18L1-204ENST00000491916 IGKV5-2P06315 115 aa19.48■□□□□ 0.71
SS18L1-204ENST00000491916 CRY2Q49AN0 593 aa19.48■□□□□ 0.71
SS18L1-204ENST00000491916 PDZRN3Q9UPQ7 1066 aa19.48■□□□□ 0.71
SS18L1-204ENST00000491916 BCS1LQ9Y276 419 aa19.48■□□□□ 0.71
SS18L1-204ENST00000491916 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
SS18L1-204ENST00000491916 MRPL50Q8N5N7 158 aaKnown RBP19.47■□□□□ 0.71
SS18L1-204ENST00000491916 MYD88Q99836 296 aa19.47■□□□□ 0.71
SS18L1-204ENST00000491916 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 NPHP1O15259 732 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 GRIN3BO60391 1043 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 DDX58O95786 925 aaKnown RBP19.46■□□□□ 0.71
SS18L1-204ENST00000491916 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 RNF123Q5XPI4 1314 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 SLX4Q8IY92 1834 aa19.46■□□□□ 0.71
SS18L1-204ENST00000491916 STYK1Q6J9G0 422 aa19.45■□□□□ 0.7
SS18L1-204ENST00000491916 TTLL6Q8N841 843 aa19.45■□□□□ 0.7
SS18L1-204ENST00000491916 MASTLQ96GX5 879 aa19.45■□□□□ 0.7
SS18L1-204ENST00000491916 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
SS18L1-204ENST00000491916 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
SS18L1-204ENST00000491916 CHD4Q14839 1912 aa19.45■□□□□ 0.7
SS18L1-204ENST00000491916 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
SS18L1-204ENST00000491916 CCDC191Q8NCU4 936 aa19.44■□□□□ 0.7
SS18L1-204ENST00000491916 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.7
SS18L1-204ENST00000491916 FAM89AQ96GI7 184 aa19.44■□□□□ 0.7
SS18L1-204ENST00000491916 DDX60Q8IY21 1712 aaKnown RBP19.44■□□□□ 0.7
SS18L1-204ENST00000491916 LAMB2P55268 1798 aa19.44■□□□□ 0.7
SS18L1-204ENST00000491916 HCLS1P14317 486 aaPredicted RBP19.43■□□□□ 0.7
SS18L1-204ENST00000491916 NPR1P16066 1061 aa19.43■□□□□ 0.7
SS18L1-204ENST00000491916 HOXA10P31260 410 aaPredicted RBP19.43■□□□□ 0.7
SS18L1-204ENST00000491916 FKBP5Q13451 457 aaPredicted RBP19.43■□□□□ 0.7
SS18L1-204ENST00000491916 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
SS18L1-204ENST00000491916 SH3TC1Q8TE82 1336 aa19.43■□□□□ 0.7
SS18L1-204ENST00000491916 F6X3S4 739 aa19.42■□□□□ 0.7
SS18L1-204ENST00000491916 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
SS18L1-204ENST00000491916 CWF19L2Q2TBE0 894 aaKnown RBP19.42■□□□□ 0.7
SS18L1-204ENST00000491916 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
SS18L1-204ENST00000491916 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
SS18L1-204ENST00000491916 ALDH1L2Q3SY69 923 aa19.41■□□□□ 0.7
SS18L1-204ENST00000491916 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
SS18L1-204ENST00000491916 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
SS18L1-204ENST00000491916 CACNA1SQ13698 1873 aa19.4■□□□□ 0.7
SS18L1-204ENST00000491916 PCCAP05165 728 aaPredicted RBP19.4■□□□□ 0.7
SS18L1-204ENST00000491916 PRPF40BQ6NWY9 871 aaKnown RBP19.4■□□□□ 0.7
SS18L1-204ENST00000491916 JARID2Q92833 1246 aaPredicted RBP19.4■□□□□ 0.7
SS18L1-204ENST00000491916 BCL2L13Q9BXK5 485 aa19.4■□□□□ 0.7
SS18L1-204ENST00000491916 CWC25Q9NXE8 425 aaPredicted RBP19.4■□□□□ 0.7
SS18L1-204ENST00000491916 PRELPP51888 382 aa19.39■□□□□ 0.69
SS18L1-204ENST00000491916 RARSP54136 660 aaKnown RBP19.39■□□□□ 0.69
SS18L1-204ENST00000491916 BRPF1P55201 1214 aaPredicted RBP19.39■□□□□ 0.69
SS18L1-204ENST00000491916 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
SS18L1-204ENST00000491916 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
SS18L1-204ENST00000491916 SLC51AQ86UW1 340 aa19.39■□□□□ 0.69
SS18L1-204ENST00000491916 NLRP3Q96P20 1036 aa19.39■□□□□ 0.69
SS18L1-204ENST00000491916 COL4A1P02462 1669 aa19.38■□□□□ 0.69
SS18L1-204ENST00000491916 CASP7P55210 303 aa19.38■□□□□ 0.69
SS18L1-204ENST00000491916 ARHGAP27Q6ZUM4 889 aa19.38■□□□□ 0.69
SS18L1-204ENST00000491916 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 H7C1W4 665 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 IRS4O14654 1257 aaPredicted RBP19.37■□□□□ 0.69
SS18L1-204ENST00000491916 C21orf2O43822 256 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 GCKRQ14397 625 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 OLFM4Q6UX06 510 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 SBF1O95248 1867 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 TAF1P21675 1872 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 FER1L6Q2WGJ9 1857 aa19.37■□□□□ 0.69
SS18L1-204ENST00000491916 NFKBIEO00221 500 aa19.36■□□□□ 0.69
SS18L1-204ENST00000491916 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
SS18L1-204ENST00000491916 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
SS18L1-204ENST00000491916 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
SS18L1-204ENST00000491916 ALDH1B1P30837 517 aa19.35■□□□□ 0.69
SS18L1-204ENST00000491916 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
SS18L1-204ENST00000491916 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
SS18L1-204ENST00000491916 ABCC4O15439 1325 aa19.34■□□□□ 0.69
SS18L1-204ENST00000491916 PTPRCP08575 1304 aa19.34■□□□□ 0.69
SS18L1-204ENST00000491916 YY1P25490 414 aa19.34■□□□□ 0.69
SS18L1-204ENST00000491916 RASSF7Q02833 373 aa19.34■□□□□ 0.69
SS18L1-204ENST00000491916 RPGRQ92834 1020 aaKnown RBP19.34■□□□□ 0.69
SS18L1-204ENST00000491916 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
SS18L1-204ENST00000491916 PDE8AO60658 829 aa19.32■□□□□ 0.68
SS18L1-204ENST00000491916 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
SS18L1-204ENST00000491916 BCAR3O75815 825 aa19.31■□□□□ 0.68
SS18L1-204ENST00000491916 UBE3BQ7Z3V4 1068 aa19.31■□□□□ 0.68
SS18L1-204ENST00000491916 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
SS18L1-204ENST00000491916 LTBP3Q9NS15 1303 aa19.3■□□□□ 0.68
SS18L1-204ENST00000491916 ALDH1L1O75891 902 aa19.3■□□□□ 0.68
SS18L1-204ENST00000491916 GRAPQ13588 217 aa19.3■□□□□ 0.68
SS18L1-204ENST00000491916 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
SS18L1-204ENST00000491916 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms