RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
C3orf49-202ENST00000491896 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
C3orf49-202ENST00000491896 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
C3orf49-202ENST00000491896 TTLL6Q8N841 843 aa15.4■□□□□ 0.06
C3orf49-202ENST00000491896 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
C3orf49-202ENST00000491896 ADCY9O60503 1353 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 SRGNP10124 158 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 HSP90B1P14625 803 aaKnown RBP15.39■□□□□ 0.05
C3orf49-202ENST00000491896 C2CD5Q86YS7 1000 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 CNKSR1Q969H4 720 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 MASTLQ96GX5 879 aa15.39■□□□□ 0.05
C3orf49-202ENST00000491896 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
C3orf49-202ENST00000491896 ANXA1P04083 346 aa15.38■□□□□ 0.05
C3orf49-202ENST00000491896 NPR1P16066 1061 aa15.38■□□□□ 0.05
C3orf49-202ENST00000491896 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
C3orf49-202ENST00000491896 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
C3orf49-202ENST00000491896 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
C3orf49-202ENST00000491896 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 VAMP4O75379 141 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
C3orf49-202ENST00000491896 CHRNA5P30532 468 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 AIMP1Q12904 312 aaKnown RBP15.37■□□□□ 0.05
C3orf49-202ENST00000491896 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 ISCA1Q9BUE6 129 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
C3orf49-202ENST00000491896 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
C3orf49-202ENST00000491896 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
C3orf49-202ENST00000491896 YY1P25490 414 aa15.36■□□□□ 0.05
C3orf49-202ENST00000491896 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
C3orf49-202ENST00000491896 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
C3orf49-202ENST00000491896 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
C3orf49-202ENST00000491896 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
C3orf49-202ENST00000491896 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
C3orf49-202ENST00000491896 GPTP24298 496 aa15.35■□□□□ 0.05
C3orf49-202ENST00000491896 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
C3orf49-202ENST00000491896 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
C3orf49-202ENST00000491896 SLFN5Q08AF3 891 aa15.35■□□□□ 0.05
C3orf49-202ENST00000491896 MIER1Q8N108 512 aa15.35■□□□□ 0.05
C3orf49-202ENST00000491896 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
C3orf49-202ENST00000491896 DDX60Q8IY21 1712 aaKnown RBP15.34■□□□□ 0.05
C3orf49-202ENST00000491896 FLIIQ13045 1269 aa15.34■□□□□ 0.05
C3orf49-202ENST00000491896 KSR2Q6VAB6 950 aa15.34■□□□□ 0.05
C3orf49-202ENST00000491896 RIC3Q7Z5B4 369 aa15.34■□□□□ 0.05
C3orf49-202ENST00000491896 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
C3orf49-202ENST00000491896 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
C3orf49-202ENST00000491896 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
C3orf49-202ENST00000491896 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
C3orf49-202ENST00000491896 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
C3orf49-202ENST00000491896 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
C3orf49-202ENST00000491896 PRPF40BQ6NWY9 871 aaKnown RBP15.33■□□□□ 0.04
C3orf49-202ENST00000491896 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
C3orf49-202ENST00000491896 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
C3orf49-202ENST00000491896 ZBTB38Q8NAP3 1195 aaPredicted RBP15.32■□□□□ 0.04
C3orf49-202ENST00000491896 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
C3orf49-202ENST00000491896 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
C3orf49-202ENST00000491896 LRRC37AA6NMS7 1700 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 TMC4Q7Z404 712 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
C3orf49-202ENST00000491896 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 SNED1Q8TER0 1413 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 SBF1O95248 1867 aa15.31■□□□□ 0.04
C3orf49-202ENST00000491896 PI4KAP2A4QPH2 592 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
C3orf49-202ENST00000491896 PTPRCP08575 1304 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 BRPF1P55201 1214 aaPredicted RBP15.3■□□□□ 0.04
C3orf49-202ENST00000491896 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 PI4KAP1Q8N8J0 262 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.04
C3orf49-202ENST00000491896 RBM17Q96I25 401 aaKnown RBP15.3■□□□□ 0.04
C3orf49-202ENST00000491896 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
C3orf49-202ENST00000491896 MAP3K2Q9Y2U5 619 aa15.3■□□□□ 0.04
C3orf49-202ENST00000491896 TIAM2Q8IVF5 1701 aa15.29■□□□□ 0.04
C3orf49-202ENST00000491896 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
C3orf49-202ENST00000491896 FKBP5Q13451 457 aaPredicted RBP15.29■□□□□ 0.04
C3orf49-202ENST00000491896 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
C3orf49-202ENST00000491896 C7orf43Q8WVR3 580 aa15.29■□□□□ 0.04
C3orf49-202ENST00000491896 DICER1Q9UPY3 1922 aaKnown RBP15.29■□□□□ 0.04
C3orf49-202ENST00000491896 RTL9Q8NET4 1388 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 MYH3P11055 1940 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 FAM177BA6PVY3 158 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 LMNB1P20700 586 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
C3orf49-202ENST00000491896 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 DNAAF4Q8WXU2 420 aa15.28■□□□□ 0.04
C3orf49-202ENST00000491896 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
C3orf49-202ENST00000491896 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.04
C3orf49-202ENST00000491896 PSMD1Q99460 953 aa15.27■□□□□ 0.04
C3orf49-202ENST00000491896 MYD88Q99836 296 aa15.27■□□□□ 0.04
C3orf49-202ENST00000491896 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
C3orf49-202ENST00000491896 NFKBIEO00221 500 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms