RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
SSR4-212ENST00000491833 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
SSR4-212ENST00000491833 NUP98P52948 1817 aa19.25■□□□□ 0.67
SSR4-212ENST00000491833 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
SSR4-212ENST00000491833 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
SSR4-212ENST00000491833 GJA3Q9Y6H8 435 aa19.25■□□□□ 0.67
SSR4-212ENST00000491833 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
SSR4-212ENST00000491833 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
SSR4-212ENST00000491833 DDX21Q9NR30 783 aaKnown RBP eCLIP19.24■□□□□ 0.67
SSR4-212ENST00000491833 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
SSR4-212ENST00000491833 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
SSR4-212ENST00000491833 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
SSR4-212ENST00000491833 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
SSR4-212ENST00000491833 MAP3K15Q6ZN16 1313 aa19.22■□□□□ 0.67
SSR4-212ENST00000491833 SCNN1DP51172 638 aa19.21■□□□□ 0.67
SSR4-212ENST00000491833 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
SSR4-212ENST00000491833 LARGE2Q8N3Y3 721 aa19.21■□□□□ 0.67
SSR4-212ENST00000491833 NGEFQ8N5V2 710 aa19.21■□□□□ 0.67
SSR4-212ENST00000491833 ABHD8Q96I13 439 aa19.21■□□□□ 0.67
SSR4-212ENST00000491833 TRPM7Q96QT4 1865 aa19.2■□□□□ 0.66
SSR4-212ENST00000491833 DLG5Q8TDM6 1919 aa19.2■□□□□ 0.66
SSR4-212ENST00000491833 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
SSR4-212ENST00000491833 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
SSR4-212ENST00000491833 ECE1P42892 770 aa19.2■□□□□ 0.66
SSR4-212ENST00000491833 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
SSR4-212ENST00000491833 HOXA10P31260 410 aaPredicted RBP19.19■□□□□ 0.66
SSR4-212ENST00000491833 RBM17Q96I25 401 aaKnown RBP19.19■□□□□ 0.66
SSR4-212ENST00000491833 CAPNS2Q96L46 248 aa19.19■□□□□ 0.66
SSR4-212ENST00000491833 BEGAINQ9BUH8 593 aa19.19■□□□□ 0.66
SSR4-212ENST00000491833 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
SSR4-212ENST00000491833 UBN2Q6ZU65 1347 aa19.19■□□□□ 0.66
SSR4-212ENST00000491833 NEFMP07197 916 aa19.18■□□□□ 0.66
SSR4-212ENST00000491833 GPTP24298 496 aa19.18■□□□□ 0.66
SSR4-212ENST00000491833 EPS15P42566 896 aa19.18■□□□□ 0.66
SSR4-212ENST00000491833 USP50Q70EL3 339 aaPredicted RBP19.18■□□□□ 0.66
SSR4-212ENST00000491833 NIM1KQ8IY84 436 aa19.18■□□□□ 0.66
SSR4-212ENST00000491833 GRM1Q13255 1194 aa19.17■□□□□ 0.66
SSR4-212ENST00000491833 TTLL7Q6ZT98 887 aa19.17■□□□□ 0.66
SSR4-212ENST00000491833 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
SSR4-212ENST00000491833 ZBTB3Q9H5J0 574 aa19.17■□□□□ 0.66
SSR4-212ENST00000491833 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
SSR4-212ENST00000491833 PPIP5K2O43314 1243 aa19.16■□□□□ 0.66
SSR4-212ENST00000491833 MYL6BP14649 208 aa19.16■□□□□ 0.66
SSR4-212ENST00000491833 FMR1Q06787 632 aaKnown RBP eCLIP19.16■□□□□ 0.66
SSR4-212ENST00000491833 CYP4F22Q6NT55 531 aa19.16■□□□□ 0.66
SSR4-212ENST00000491833 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
SSR4-212ENST00000491833 NTSR2O95665 410 aa19.15■□□□□ 0.66
SSR4-212ENST00000491833 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
SSR4-212ENST00000491833 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
SSR4-212ENST00000491833 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
SSR4-212ENST00000491833 TMX4Q9H1E5 349 aaPredicted RBP19.15■□□□□ 0.66
SSR4-212ENST00000491833 TLL2Q9Y6L7 1015 aa19.15■□□□□ 0.66
SSR4-212ENST00000491833 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
SSR4-212ENST00000491833 SLC51AQ86UW1 340 aa19.14■□□□□ 0.65
SSR4-212ENST00000491833 GPR101Q96P66 508 aaPredicted RBP19.14■□□□□ 0.65
SSR4-212ENST00000491833 ERBB4Q15303 1308 aa19.14■□□□□ 0.65
SSR4-212ENST00000491833 TRAF5O00463 557 aa19.13■□□□□ 0.65
SSR4-212ENST00000491833 AOC3Q16853 763 aa19.13■□□□□ 0.65
SSR4-212ENST00000491833 PARP10Q53GL7 1025 aa19.13■□□□□ 0.65
SSR4-212ENST00000491833 GIGYF2Q6Y7W6 1299 aaKnown RBP19.13■□□□□ 0.65
SSR4-212ENST00000491833 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
SSR4-212ENST00000491833 VPS33BQ9H267 617 aa19.13■□□□□ 0.65
SSR4-212ENST00000491833 ADARB2Q9NS39 739 aaKnown RBP19.13■□□□□ 0.65
SSR4-212ENST00000491833 CST9Q5W186 159 aa19.12■□□□□ 0.65
SSR4-212ENST00000491833 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
SSR4-212ENST00000491833 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
SSR4-212ENST00000491833 GPRC5DQ9NZD1 345 aa19.12■□□□□ 0.65
SSR4-212ENST00000491833 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
SSR4-212ENST00000491833 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
SSR4-212ENST00000491833 ANKRD36CQ5JPF3 1778 aa19.11■□□□□ 0.65
SSR4-212ENST00000491833 ABCC4O15439 1325 aa19.1■□□□□ 0.65
SSR4-212ENST00000491833 CDHR2Q9BYE9 1310 aa19.1■□□□□ 0.65
SSR4-212ENST00000491833 LAMB2P55268 1798 aa19.1■□□□□ 0.65
SSR4-212ENST00000491833 CCDC85CA6NKD9 419 aa19.09■□□□□ 0.65
SSR4-212ENST00000491833 CELF2O95319 508 aaKnown RBP19.09■□□□□ 0.65
SSR4-212ENST00000491833 SLC34A2O95436 690 aa19.09■□□□□ 0.65
SSR4-212ENST00000491833 MAP2K2P36507 400 aa19.09■□□□□ 0.65
SSR4-212ENST00000491833 ZNRF3Q9ULT6 936 aa19.09■□□□□ 0.65
SSR4-212ENST00000491833 AOC2O75106 756 aa19.08■□□□□ 0.64
SSR4-212ENST00000491833 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
SSR4-212ENST00000491833 CXCL9Q07325 125 aa19.08■□□□□ 0.64
SSR4-212ENST00000491833 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
SSR4-212ENST00000491833 SAPCD2Q86UD0 394 aa19.08■□□□□ 0.64
SSR4-212ENST00000491833 THUMPD2Q9BTF0 503 aaKnown RBP19.08■□□□□ 0.64
SSR4-212ENST00000491833 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
SSR4-212ENST00000491833 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
SSR4-212ENST00000491833 TSKSQ9UJT2 592 aa19.08■□□□□ 0.64
SSR4-212ENST00000491833 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
SSR4-212ENST00000491833 CA12O43570 354 aa19.07■□□□□ 0.64
SSR4-212ENST00000491833 MLLT1Q03111 559 aaPredicted RBP19.07■□□□□ 0.64
SSR4-212ENST00000491833 CIAPIN1Q6FI81 312 aa19.07■□□□□ 0.64
SSR4-212ENST00000491833 DPP8Q6V1X1 898 aaPredicted RBP19.07■□□□□ 0.64
SSR4-212ENST00000491833 HHIPL1Q96JK4 782 aa19.07■□□□□ 0.64
SSR4-212ENST00000491833 GLIS2Q9BZE0 524 aaPredicted RBP19.07■□□□□ 0.64
SSR4-212ENST00000491833 PLEKHF1Q96S99 279 aa19.06■□□□□ 0.64
SSR4-212ENST00000491833 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
SSR4-212ENST00000491833 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
SSR4-212ENST00000491833 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
SSR4-212ENST00000491833 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
SSR4-212ENST00000491833 LRRC37AA6NMS7 1700 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms