RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 TNRC6CQ9HCJ0 1690 aaKnown RBP29.82■■■□□ 2.36
CPNE9-204ENST00000491802 SRGNP10124 158 aa29.82■■■□□ 2.36
CPNE9-204ENST00000491802 PPP1R42Q7Z4L9 355 aa29.82■■■□□ 2.36
CPNE9-204ENST00000491802 ERFEQ4G0M1 354 aa29.81■■■□□ 2.36
CPNE9-204ENST00000491802 STYK1Q6J9G0 422 aa29.81■■■□□ 2.36
CPNE9-204ENST00000491802 G2E3Q7L622 706 aa29.81■■■□□ 2.36
CPNE9-204ENST00000491802 NLRP10Q86W26 655 aa29.81■■■□□ 2.36
CPNE9-204ENST00000491802 UTP14AQ9BVJ6 771 aaKnown RBP29.8■■■□□ 2.36
CPNE9-204ENST00000491802 ATP5J2-PTCD1G3V325 749 aa29.79■■■□□ 2.36
CPNE9-204ENST00000491802 MASTLQ96GX5 879 aa29.79■■■□□ 2.36
CPNE9-204ENST00000491802 ISCA1Q9BUE6 129 aa29.79■■■□□ 2.36
CPNE9-204ENST00000491802 FLIIQ13045 1269 aa29.78■■■□□ 2.36
CPNE9-204ENST00000491802 CNKSR1Q969H4 720 aa29.78■■■□□ 2.36
CPNE9-204ENST00000491802 ADCY9O60503 1353 aa29.77■■■□□ 2.36
CPNE9-204ENST00000491802 CRY2Q49AN0 593 aa29.77■■■□□ 2.36
CPNE9-204ENST00000491802 TRMT2AQ8IZ69 625 aaKnown RBP29.77■■■□□ 2.36
CPNE9-204ENST00000491802 CACNA1SQ13698 1873 aa29.76■■■□□ 2.36
CPNE9-204ENST00000491802 TRIM28Q13263 835 aaKnown RBP29.76■■■□□ 2.35
CPNE9-204ENST00000491802 ZNF622Q969S3 477 aaKnown RBP eCLIP29.76■■■□□ 2.35
CPNE9-204ENST00000491802 ZNF428Q96B54 188 aa29.76■■■□□ 2.35
CPNE9-204ENST00000491802 MYD88Q99836 296 aa29.76■■■□□ 2.35
CPNE9-204ENST00000491802 MAP3K2Q9Y2U5 619 aa29.76■■■□□ 2.35
CPNE9-204ENST00000491802 SBF1O95248 1867 aa29.76■■■□□ 2.35
CPNE9-204ENST00000491802 SLX4Q8IY92 1834 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 PI4KAP2A4QPH2 592 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 NPR1P16066 1061 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 SLC10A5Q5PT55 438 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 KSR2Q6VAB6 950 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 PI4KAP1Q8N8J0 262 aa29.75■■■□□ 2.35
CPNE9-204ENST00000491802 FKBP5Q13451 457 aaPredicted RBP29.74■■■□□ 2.35
CPNE9-204ENST00000491802 ARHGAP27Q6ZUM4 889 aa29.74■■■□□ 2.35
CPNE9-204ENST00000491802 METTL22Q9BUU2 404 aaPredicted RBP29.74■■■□□ 2.35
CPNE9-204ENST00000491802 TRMT112Q9UI30 125 aaKnown RBP29.74■■■□□ 2.35
CPNE9-204ENST00000491802 FER1L6Q2WGJ9 1857 aa29.73■■■□□ 2.35
CPNE9-204ENST00000491802 SH3TC1Q8TE82 1336 aa29.72■■■□□ 2.35
CPNE9-204ENST00000491802 LAMB2P55268 1798 aa29.7■■■□□ 2.35
CPNE9-204ENST00000491802 ZNF784Q8NCA9 323 aaPredicted RBP29.7■■■□□ 2.35
CPNE9-204ENST00000491802 HOXA10P31260 410 aaPredicted RBP29.69■■■□□ 2.34
CPNE9-204ENST00000491802 SYNE4Q8N205 404 aa29.69■■■□□ 2.34
CPNE9-204ENST00000491802 ALDH1B1P30837 517 aa29.68■■■□□ 2.34
CPNE9-204ENST00000491802 NEXNQ0ZGT2 675 aa29.68■■■□□ 2.34
CPNE9-204ENST00000491802 SOGA3Q5TF21 947 aa29.68■■■□□ 2.34
CPNE9-204ENST00000491802 PRPF40BQ6NWY9 871 aaKnown RBP29.68■■■□□ 2.34
CPNE9-204ENST00000491802 C3orf67Q6ZVT6 689 aa29.68■■■□□ 2.34
CPNE9-204ENST00000491802 DDX60Q8IY21 1712 aaKnown RBP29.68■■■□□ 2.34
CPNE9-204ENST00000491802 HCLS1P14317 486 aaPredicted RBP29.67■■■□□ 2.34
CPNE9-204ENST00000491802 CCDC191Q8NCU4 936 aa29.67■■■□□ 2.34
CPNE9-204ENST00000491802 C7orf43Q8WVR3 580 aa29.67■■■□□ 2.34
CPNE9-204ENST00000491802 FAM89AQ96GI7 184 aa29.67■■■□□ 2.34
CPNE9-204ENST00000491802 CWC25Q9NXE8 425 aaPredicted RBP29.67■■■□□ 2.34
CPNE9-204ENST00000491802 ZBED9Q6R2W3 1325 aa29.67■■■□□ 2.34
CPNE9-204ENST00000491802 IGKV5-2P06315 115 aa29.66■■■□□ 2.34
CPNE9-204ENST00000491802 DNAAF4Q8WXU2 420 aa29.66■■■□□ 2.34
CPNE9-204ENST00000491802 RPGRQ92834 1020 aaKnown RBP29.66■■■□□ 2.34
CPNE9-204ENST00000491802 NLRP3Q96P20 1036 aa29.66■■■□□ 2.34
CPNE9-204ENST00000491802 RTL5Q5HYW3 569 aaPredicted RBP29.65■■■□□ 2.34
CPNE9-204ENST00000491802 SSH1Q8WYL5 1049 aa29.65■■■□□ 2.34
CPNE9-204ENST00000491802 CCDC88AQ3V6T2 1871 aa29.64■■■□□ 2.34
CPNE9-204ENST00000491802 CT47B1P0C2W7 299 aaPredicted RBP29.64■■■□□ 2.34
CPNE9-204ENST00000491802 MRPL50Q8N5N7 158 aaKnown RBP29.64■■■□□ 2.34
CPNE9-204ENST00000491802 BCL2L13Q9BXK5 485 aa29.64■■■□□ 2.34
CPNE9-204ENST00000491802 ZNF219Q9P2Y4 722 aaPredicted RBP29.64■■■□□ 2.34
CPNE9-204ENST00000491802 LTBP3Q9NS15 1303 aa29.64■■■□□ 2.34
CPNE9-204ENST00000491802 DICER1Q9UPY3 1922 aaKnown RBP29.63■■■□□ 2.33
CPNE9-204ENST00000491802 C21orf2O43822 256 aa29.63■■■□□ 2.33
CPNE9-204ENST00000491802 CWF19L2Q2TBE0 894 aaKnown RBP29.63■■■□□ 2.33
CPNE9-204ENST00000491802 ZBTB38Q8NAP3 1195 aaPredicted RBP29.63■■■□□ 2.33
CPNE9-204ENST00000491802 CRAMP1Q96RY5 1269 aa29.63■■■□□ 2.33
CPNE9-204ENST00000491802 F6X3S4 739 aa29.62■■■□□ 2.33
CPNE9-204ENST00000491802 NFKBIEO00221 500 aa29.62■■■□□ 2.33
CPNE9-204ENST00000491802 NEURL1BA8MQ27 555 aa29.61■■■□□ 2.33
CPNE9-204ENST00000491802 ALDH1L2Q3SY69 923 aa29.61■■■□□ 2.33
CPNE9-204ENST00000491802 SMC4Q9NTJ3 1288 aa29.61■■■□□ 2.33
CPNE9-204ENST00000491802 ZC3H4Q9UPT8 1303 aaKnown RBP29.61■■■□□ 2.33
CPNE9-204ENST00000491802 IRS4O14654 1257 aaPredicted RBP29.6■■■□□ 2.33
CPNE9-204ENST00000491802 PCCAP05165 728 aaPredicted RBP29.6■■■□□ 2.33
CPNE9-204ENST00000491802 RBM17Q96I25 401 aaKnown RBP29.6■■■□□ 2.33
CPNE9-204ENST00000491802 C9orf131Q5VYM1 1079 aa29.59■■■□□ 2.33
CPNE9-204ENST00000491802 LINS1Q8NG48 757 aa29.59■■■□□ 2.33
CPNE9-204ENST00000491802 SNED1Q8TER0 1413 aa29.59■■■□□ 2.33
CPNE9-204ENST00000491802 LMNB1P20700 586 aa29.58■■■□□ 2.33
CPNE9-204ENST00000491802 JARID2Q92833 1246 aaPredicted RBP29.58■■■□□ 2.33
CPNE9-204ENST00000491802 HSP90B1P14625 803 aaKnown RBP29.57■■■□□ 2.32
CPNE9-204ENST00000491802 RASSF7Q02833 373 aa29.57■■■□□ 2.32
CPNE9-204ENST00000491802 CCDC93Q567U6 631 aa29.57■■■□□ 2.32
CPNE9-204ENST00000491802 CC2D2BQ6DHV5 1058 aa29.57■■■□□ 2.32
CPNE9-204ENST00000491802 PTPRCP08575 1304 aa29.56■■■□□ 2.32
CPNE9-204ENST00000491802 GRIPAP1Q4V328 841 aa29.56■■■□□ 2.32
CPNE9-204ENST00000491802 ABCC4O15439 1325 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 TIAM2Q8IVF5 1701 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 PRELPP51888 382 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 GCKRQ14397 625 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 SF3B3Q15393 1217 aaKnown RBP29.55■■■□□ 2.32
CPNE9-204ENST00000491802 TAOK3Q9H2K8 898 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 RNF181Q9P0P0 153 aa29.55■■■□□ 2.32
CPNE9-204ENST00000491802 CDHR2Q9BYE9 1310 aa29.54■■■□□ 2.32
CPNE9-204ENST00000491802 BEND3Q5T5X7 828 aa29.54■■■□□ 2.32
CPNE9-204ENST00000491802 SLC4A10Q6U841 1118 aa29.54■■■□□ 2.32
CPNE9-204ENST00000491802 RTKN2Q8IZC4 609 aa29.54■■■□□ 2.32
CPNE9-204ENST00000491802 PPEF1O14829 653 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms