RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TMEM88BA6NKF7 163 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 GPR37L1O60883 481 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 EIF4G2P78344 907 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLIP4-211ENST00000491701 SEMA3FQ13275 785 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 TXNDC2Q86VQ3 553 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 ZFAND3Q9H8U3 227 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 C14orf93Q9H972 538 aaKnown RBP6.25□□□□□ -1.41
CLIP4-211ENST00000491701 SLC52A1Q9NWF4 448 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 GPSM3Q9Y4H4 160 aa6.25□□□□□ -1.41
CLIP4-211ENST00000491701 MYOM2P54296 1465 aa6.24□□□□□ -1.41
CLIP4-211ENST00000491701 PPFIA3O75145 1194 aa6.24□□□□□ -1.41
CLIP4-211ENST00000491701 ERCC3P19447 782 aa6.24□□□□□ -1.41
CLIP4-211ENST00000491701 LTKP29376 864 aa6.24□□□□□ -1.41
CLIP4-211ENST00000491701 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
CLIP4-211ENST00000491701 MED14O60244 1454 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 WASHC2AQ641Q2 1341 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 RPGRIP1LQ68CZ1 1315 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 KDM5AP29375 1690 aaKnown RBP6.23□□□□□ -1.41
CLIP4-211ENST00000491701 MAN1A2O60476 641 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 ATG7O95352 703 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 ZIC2O95409 532 aaPredicted RBP6.23□□□□□ -1.41
CLIP4-211ENST00000491701 FSHRP23945 695 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 HSPA2P54652 639 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 DRC1Q96MC2 740 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 ARHGAP23Q9P227 1491 aa6.23□□□□□ -1.41
CLIP4-211ENST00000491701 PIK3C2GO75747 1445 aa6.22□□□□□ -1.41
CLIP4-211ENST00000491701 LMOD1P29536 600 aaPredicted RBP6.22□□□□□ -1.41
CLIP4-211ENST00000491701 B4GALNT3Q6L9W6 998 aa6.22□□□□□ -1.41
CLIP4-211ENST00000491701 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
CLIP4-211ENST00000491701 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
CLIP4-211ENST00000491701 KCTD15Q96SI1 283 aaPredicted RBP6.22□□□□□ -1.41
CLIP4-211ENST00000491701 POLR1AO95602 1720 aaPredicted RBP6.22□□□□□ -1.41
CLIP4-211ENST00000491701 TNRQ92752 1358 aa6.21□□□□□ -1.41
CLIP4-211ENST00000491701 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
CLIP4-211ENST00000491701 NR3C2P08235 984 aa6.21□□□□□ -1.42
CLIP4-211ENST00000491701 KRT76Q01546 638 aa6.21□□□□□ -1.42
CLIP4-211ENST00000491701 C1QTNF2Q9BXJ5 285 aa6.21□□□□□ -1.42
CLIP4-211ENST00000491701 ADAMTS13Q76LX8 1427 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 ST20-MTHFSA0A0A6YYL1 179 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 GIGYF1O75420 1035 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-211ENST00000491701 NBPF20Q3BBV1 942 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 SLFNL1Q499Z3 407 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 TMEM132EQ6IEE7 984 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 DNAJC14Q6Y2X3 702 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-211ENST00000491701 GPR161Q8N6U8 529 aaKnown RBP6.2□□□□□ -1.42
CLIP4-211ENST00000491701 ESF1Q9H501 851 aaKnown RBP6.2□□□□□ -1.42
CLIP4-211ENST00000491701 SETBP1Q9Y6X0 1596 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 ALKQ9UM73 1620 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 CCDC7Q96M83 1385 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 RIMS2Q9UQ26 1411 aa6.2□□□□□ -1.42
CLIP4-211ENST00000491701 SLIT1O75093 1534 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 TCF3P15923 654 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 ZNF16P17020 682 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-211ENST00000491701 RASSF7Q02833 373 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 LINC00528Q8N1L1 170 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 TMEM151AQ8N4L1 468 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
CLIP4-211ENST00000491701 DNMT3LQ9UJW3 386 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 KIF7Q2M1P5 1343 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 USP47Q96K76 1375 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 TMEM2Q9UHN6 1383 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 PTPRUQ92729 1446 aa6.19□□□□□ -1.42
CLIP4-211ENST00000491701 MYO3AQ8NEV4 1616 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 SMARCA5O60264 1052 aaPredicted RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 GDF11O95390 407 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 BMP2P12643 396 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 GRM5P41594 1212 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 CDCA8Q53HL2 280 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 ZNF326Q5BKZ1 582 aaKnown RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 TRMT44Q8IYL2 757 aaKnown RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 ZNF592Q92610 1267 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 C8orf37Q96NL8 207 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 CEP126Q9P2H0 1117 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 CDV3Q9UKY7 258 aaKnown RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 SOS2Q07890 1332 aaPredicted RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 METP08581 1390 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 NLRP1Q9C000 1473 aa6.18□□□□□ -1.42
CLIP4-211ENST00000491701 ARHGEF28Q8N1W1 1705 aaKnown RBP6.18□□□□□ -1.42
CLIP4-211ENST00000491701 DDX10Q13206 875 aaKnown RBP6.17□□□□□ -1.42
CLIP4-211ENST00000491701 NR5A1Q13285 461 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 INTS6LQ5JSJ4 861 aaKnown RBP6.17□□□□□ -1.42
CLIP4-211ENST00000491701 RNF135Q8IUD6 432 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 CNTNAP3BQ96NU0 1288 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 CARD11Q9BXL7 1154 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 CNTNAP3Q9BZ76 1288 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 ALG2Q9H553 416 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 ADAMTS8Q9UP79 889 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 DISP3Q9P2K9 1392 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 IQSEC2Q5JU85 1478 aa6.17□□□□□ -1.42
CLIP4-211ENST00000491701 ZNF142P52746 1687 aaPredicted RBP6.17□□□□□ -1.42
CLIP4-211ENST00000491701 SOX11P35716 441 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 DIEXFQ68CQ4 756 aaKnown RBP6.16□□□□□ -1.42
CLIP4-211ENST00000491701 CCDC116Q8IYX3 515 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 BCL2L13Q9BXK5 485 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms