RNA–Protein interactions for RNA: ENST00000491645.1

STX1A-211, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 650 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-211ENST00000491645 RTKN2Q8IZC4 609 aa24.46■■□□□ 1.51
STX1A-211ENST00000491645 RPGRQ92834 1020 aaKnown RBP24.46■■□□□ 1.51
STX1A-211ENST00000491645 SLX4Q8IY92 1834 aa24.46■■□□□ 1.51
STX1A-211ENST00000491645 NUP98P52948 1817 aa24.45■■□□□ 1.5
STX1A-211ENST00000491645 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.5
STX1A-211ENST00000491645 TNRC6CQ9HCJ0 1690 aaKnown RBP24.44■■□□□ 1.5
STX1A-211ENST00000491645 ANP32CO43423 234 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 VEGFAP15692 232 aaPredicted RBP24.44■■□□□ 1.5
STX1A-211ENST00000491645 FSTL1Q12841 308 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 TCIRG1Q13488 830 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 CCDC184Q52MB2 194 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 SLC10A5Q5PT55 438 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 CC2D2BQ6DHV5 1058 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 HYPKQ9NX55 129 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 FER1L6Q2WGJ9 1857 aa24.44■■□□□ 1.5
STX1A-211ENST00000491645 RBM17Q96I25 401 aaKnown RBP24.43■■□□□ 1.5
STX1A-211ENST00000491645 NLRP3Q96P20 1036 aa24.43■■□□□ 1.5
STX1A-211ENST00000491645 CRAMP1Q96RY5 1269 aa24.43■■□□□ 1.5
STX1A-211ENST00000491645 TIAM2Q8IVF5 1701 aa24.42■■□□□ 1.5
STX1A-211ENST00000491645 NLRP10Q86W26 655 aa24.42■■□□□ 1.5
STX1A-211ENST00000491645 PLBD2Q8NHP8 589 aa24.42■■□□□ 1.5
STX1A-211ENST00000491645 APLP1P51693 650 aa24.41■■□□□ 1.5
STX1A-211ENST00000491645 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
STX1A-211ENST00000491645 GRIPAP1Q4V328 841 aa24.41■■□□□ 1.5
STX1A-211ENST00000491645 ANKRD13DQ6ZTN6 518 aa24.41■■□□□ 1.5
STX1A-211ENST00000491645 CHMP4AQ9BY43 222 aa24.41■■□□□ 1.5
STX1A-211ENST00000491645 OLFM4Q6UX06 510 aa24.4■■□□□ 1.5
STX1A-211ENST00000491645 MRS2Q9HD23 443 aa24.4■■□□□ 1.5
STX1A-211ENST00000491645 SNED1Q8TER0 1413 aa24.39■■□□□ 1.5
STX1A-211ENST00000491645 NCBP3Q53F19 620 aaKnown RBP24.39■■□□□ 1.49
STX1A-211ENST00000491645 SMC1BQ8NDV3 1235 aa24.39■■□□□ 1.49
STX1A-211ENST00000491645 PSMD1Q99460 953 aa24.39■■□□□ 1.49
STX1A-211ENST00000491645 CEP350Q5VT06 3117 aa24.39■■□□□ 1.49
STX1A-211ENST00000491645 SH3TC1Q8TE82 1336 aa24.38■■□□□ 1.49
STX1A-211ENST00000491645 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
STX1A-211ENST00000491645 ZNF277Q9NRM2 450 aaPredicted RBP24.38■■□□□ 1.49
STX1A-211ENST00000491645 TRMT112Q9UI30 125 aaKnown RBP24.38■■□□□ 1.49
STX1A-211ENST00000491645 PPEF1O14829 653 aaPredicted RBP24.37■■□□□ 1.49
STX1A-211ENST00000491645 POTECB2RU33 542 aa24.36■■□□□ 1.49
STX1A-211ENST00000491645 SYNE4Q8N205 404 aa24.36■■□□□ 1.49
STX1A-211ENST00000491645 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
STX1A-211ENST00000491645 IARSP41252 1262 aaKnown RBP24.35■■□□□ 1.49
STX1A-211ENST00000491645 WDR90Q96KV7 1748 aa24.35■■□□□ 1.49
STX1A-211ENST00000491645 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
STX1A-211ENST00000491645 WWC1Q8IX03 1113 aa24.34■■□□□ 1.49
STX1A-211ENST00000491645 C8orf58Q8NAV2 365 aa24.34■■□□□ 1.49
STX1A-211ENST00000491645 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
STX1A-211ENST00000491645 CACNA1SQ13698 1873 aa24.34■■□□□ 1.49
STX1A-211ENST00000491645 DDNO94850 711 aaPredicted RBP24.33■■□□□ 1.49
STX1A-211ENST00000491645 HCLS1P14317 486 aaPredicted RBP24.33■■□□□ 1.49
STX1A-211ENST00000491645 GOLGA2Q08379 1002 aa24.33■■□□□ 1.49
STX1A-211ENST00000491645 TRIM28Q13263 835 aaKnown RBP24.33■■□□□ 1.49
STX1A-211ENST00000491645 IQCA1LA6NCM1 817 aa24.32■■□□□ 1.48
STX1A-211ENST00000491645 CCDC30Q5VVM6 783 aa24.32■■□□□ 1.48
STX1A-211ENST00000491645 L3MBTL3Q96JM7 780 aaPredicted RBP24.32■■□□□ 1.48
STX1A-211ENST00000491645 ATP6V0A2Q9Y487 856 aa24.32■■□□□ 1.48
STX1A-211ENST00000491645 ABCC4O15439 1325 aa24.32■■□□□ 1.48
STX1A-211ENST00000491645 IL16Q14005 1332 aa24.32■■□□□ 1.48
STX1A-211ENST00000491645 DICER1Q9UPY3 1922 aaKnown RBP24.31■■□□□ 1.48
STX1A-211ENST00000491645 FZD9O00144 591 aa24.31■■□□□ 1.48
STX1A-211ENST00000491645 BBOX1O75936 387 aa24.31■■□□□ 1.48
STX1A-211ENST00000491645 RIC3Q7Z5B4 369 aa24.31■■□□□ 1.48
STX1A-211ENST00000491645 JDP2Q8WYK2 163 aa24.31■■□□□ 1.48
STX1A-211ENST00000491645 ANKRD36CQ5JPF3 1778 aa24.31■■□□□ 1.48
STX1A-211ENST00000491645 ATP5J2-PTCD1G3V325 749 aa24.3■■□□□ 1.48
STX1A-211ENST00000491645 DDX46Q7L014 1031 aaKnown RBP24.3■■□□□ 1.48
STX1A-211ENST00000491645 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
STX1A-211ENST00000491645 TSR2Q969E8 191 aaKnown RBP24.29■■□□□ 1.48
STX1A-211ENST00000491645 CCDC88AQ3V6T2 1871 aa24.29■■□□□ 1.48
STX1A-211ENST00000491645 ZNF541Q9H0D2 1346 aa24.29■■□□□ 1.48
STX1A-211ENST00000491645 DDX58O95786 925 aaKnown RBP24.28■■□□□ 1.48
STX1A-211ENST00000491645 VPS33BQ9H267 617 aa24.28■■□□□ 1.48
STX1A-211ENST00000491645 TCERG1O14776 1098 aaKnown RBP24.27■■□□□ 1.48
STX1A-211ENST00000491645 GRAPQ13588 217 aa24.27■■□□□ 1.48
STX1A-211ENST00000491645 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
STX1A-211ENST00000491645 TSPYL6Q8N831 410 aa24.27■■□□□ 1.48
STX1A-211ENST00000491645 GRAPLQ8TC17 118 aaPredicted RBP24.27■■□□□ 1.48
STX1A-211ENST00000491645 FAM89AQ96GI7 184 aa24.27■■□□□ 1.48
STX1A-211ENST00000491645 SP8Q8IXZ3 490 aa24.26■■□□□ 1.47
STX1A-211ENST00000491645 GPC2Q8N158 579 aa24.26■■□□□ 1.47
STX1A-211ENST00000491645 LARGE2Q8N3Y3 721 aa24.26■■□□□ 1.47
STX1A-211ENST00000491645 SUPT20HQ8NEM7 779 aa24.26■■□□□ 1.47
STX1A-211ENST00000491645 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
STX1A-211ENST00000491645 SF3B3Q15393 1217 aaKnown RBP24.25■■□□□ 1.47
STX1A-211ENST00000491645 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
STX1A-211ENST00000491645 STK31Q9BXU1 1019 aa24.25■■□□□ 1.47
STX1A-211ENST00000491645 EIF6P56537 245 aaKnown RBP24.24■■□□□ 1.47
STX1A-211ENST00000491645 SLC51AQ86UW1 340 aa24.24■■□□□ 1.47
STX1A-211ENST00000491645 WDR63Q8IWG1 891 aa24.24■■□□□ 1.47
STX1A-211ENST00000491645 ZBTB38Q8NAP3 1195 aaPredicted RBP24.24■■□□□ 1.47
STX1A-211ENST00000491645 CCDC191Q8NCU4 936 aa24.24■■□□□ 1.47
STX1A-211ENST00000491645 RTFDC1Q9BY42 306 aaPredicted RBP24.24■■□□□ 1.47
STX1A-211ENST00000491645 IRS4O14654 1257 aaPredicted RBP24.23■■□□□ 1.47
STX1A-211ENST00000491645 TWISTNBQ3B726 338 aaPredicted RBP24.23■■□□□ 1.47
STX1A-211ENST00000491645 CHADLQ6NUI6 762 aa24.23■■□□□ 1.47
STX1A-211ENST00000491645 ZNF428Q96B54 188 aa24.23■■□□□ 1.47
STX1A-211ENST00000491645 MYD88Q99836 296 aa24.23■■□□□ 1.47
STX1A-211ENST00000491645 TAF1DQ9H5J8 278 aaPredicted RBP24.23■■□□□ 1.47
STX1A-211ENST00000491645 HACL1Q9UJ83 578 aa24.23■■□□□ 1.47
STX1A-211ENST00000491645 DPP8Q6V1X1 898 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms