RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 CCT4P50991 539 aaKnown RBP14.93□□□□□ -0.02
SRGAP3-210ENST00000491467 NUCB1Q02818 461 aa14.93□□□□□ -0.02
SRGAP3-210ENST00000491467 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
SRGAP3-210ENST00000491467 CAPNS2Q96L46 248 aa14.93□□□□□ -0.02
SRGAP3-210ENST00000491467 ITGB4P16144 1822 aa14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 SKAP1Q86WV1 359 aa14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 CLEC11AQ9Y240 323 aa14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 SCN4AP35499 1836 aa14.92□□□□□ -0.02
SRGAP3-210ENST00000491467 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
SRGAP3-210ENST00000491467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.91□□□□□ -0.02
SRGAP3-210ENST00000491467 CYP4F22Q6NT55 531 aa14.9□□□□□ -0.02
SRGAP3-210ENST00000491467 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
SRGAP3-210ENST00000491467 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
SRGAP3-210ENST00000491467 PITPNM2Q9BZ72 1349 aa14.9□□□□□ -0.02
SRGAP3-210ENST00000491467 CA12O43570 354 aa14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 DDNO94850 711 aaPredicted RBP14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 EAPPQ56P03 285 aaPredicted RBP14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 CHD1LQ86WJ1 897 aa14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
SRGAP3-210ENST00000491467 TEFQ10587 303 aa14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 NPM2Q86SE8 214 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 USHBP1Q8N6Y0 703 aa14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 MIS18AQ9NYP9 233 aa14.88□□□□□ -0.03
SRGAP3-210ENST00000491467 IQCA1LA6NCM1 817 aa14.87□□□□□ -0.03
SRGAP3-210ENST00000491467 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
SRGAP3-210ENST00000491467 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
SRGAP3-210ENST00000491467 DCTPP1Q9H773 170 aa14.87□□□□□ -0.03
SRGAP3-210ENST00000491467 AOC2O75106 756 aa14.86□□□□□ -0.03
SRGAP3-210ENST00000491467 HMMRO75330 724 aa14.86□□□□□ -0.03
SRGAP3-210ENST00000491467 GNAI3P08754 354 aa14.86□□□□□ -0.03
SRGAP3-210ENST00000491467 EIF4A1P60842 406 aaKnown RBP14.86□□□□□ -0.03
SRGAP3-210ENST00000491467 MAP2K2P36507 400 aa14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 FLIIQ13045 1269 aa14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 RAPGEF4Q8WZA2 1011 aa14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 TAF1DQ9H5J8 278 aaPredicted RBP14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
SRGAP3-210ENST00000491467 TRPM7Q96QT4 1865 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 GYS1P13807 737 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 SIRT2Q8IXJ6 389 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 LGR6Q9HBX8 967 aa14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 RTCBQ9Y3I0 505 aaKnown RBP14.84□□□□□ -0.03
SRGAP3-210ENST00000491467 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
SRGAP3-210ENST00000491467 NFKBIEO00221 500 aa14.83□□□□□ -0.04
SRGAP3-210ENST00000491467 BMP2KLQ5H9B9 411 aa14.83□□□□□ -0.04
SRGAP3-210ENST00000491467 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
SRGAP3-210ENST00000491467 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 RFC4P35249 363 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 SIK1P57059 783 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 FKBP5Q13451 457 aaPredicted RBP14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 MAP1SQ66K74 1059 aaPredicted RBP14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 G2E3Q7L622 706 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 ARHGEF1Q92888 912 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 HEG1Q9ULI3 1381 aa14.82□□□□□ -0.04
SRGAP3-210ENST00000491467 DLEC1Q9Y238 1755 aa14.81□□□□□ -0.04
SRGAP3-210ENST00000491467 GNAI2P04899 355 aa14.81□□□□□ -0.04
SRGAP3-210ENST00000491467 HDAC5Q9UQL6 1122 aa14.81□□□□□ -0.04
SRGAP3-210ENST00000491467 A0A0C4DFX4 3053 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 ATP6V1AP38606 617 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 BECN1Q14457 450 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 IFNL2Q8IZJ0 200 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
SRGAP3-210ENST00000491467 MEGF6O75095 1541 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 ITPK1Q13572 414 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 FER1L6Q2WGJ9 1857 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 SLC4A10Q6U841 1118 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 ADAMTSL1Q8N6G6 1762 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 TBC1D32Q96NH3 1257 aa14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 DDX21Q9NR30 783 aaKnown RBP eCLIP14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-210ENST00000491467 TTLL6Q8N841 843 aa14.78□□□□□ -0.04
SRGAP3-210ENST00000491467 MEIS3Q99687 375 aa14.78□□□□□ -0.04
SRGAP3-210ENST00000491467 MRC1P22897 1456 aa14.77□□□□□ -0.04
SRGAP3-210ENST00000491467 ATP8B2P98198 1209 aa14.77□□□□□ -0.05
SRGAP3-210ENST00000491467 CUL9Q8IWT3 2517 aa14.76□□□□□ -0.05
SRGAP3-210ENST00000491467 F6X3S4 739 aa14.76□□□□□ -0.05
SRGAP3-210ENST00000491467 PHKG2P15735 406 aa14.76□□□□□ -0.05
SRGAP3-210ENST00000491467 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
SRGAP3-210ENST00000491467 HYPKQ9NX55 129 aa14.76□□□□□ -0.05
SRGAP3-210ENST00000491467 LAMB4A4D0S4 1761 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 ALDH1L1O75891 902 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 SEC24BO95487 1268 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 DDR1Q08345 913 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 CIAPIN1Q6FI81 312 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 PIGBQ92521 554 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 HACL1Q9UJ83 578 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms