RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CHPF2Q9P2E5 772 aa21.42■■□□□ 1.02
PDLIM2-217ENST00000491330 TRMT112Q9UI30 125 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-217ENST00000491330 DLEC1Q9Y238 1755 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 ANXA1P04083 346 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 PLBD2Q8NHP8 589 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 MRS2Q9HD23 443 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 MBIPQ9NS73 344 aa21.41■■□□□ 1.02
PDLIM2-217ENST00000491330 UBN2Q6ZU65 1347 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 IQCA1LA6NCM1 817 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 NTSR2O95665 410 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 GOLGA2Q08379 1002 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 C7orf43Q8WVR3 580 aa21.4■■□□□ 1.02
PDLIM2-217ENST00000491330 SH3TC1Q8TE82 1336 aa21.39■■□□□ 1.01
PDLIM2-217ENST00000491330 SLC10A5Q5PT55 438 aa21.39■■□□□ 1.01
PDLIM2-217ENST00000491330 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 DDX46Q7L014 1031 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 RIC3Q7Z5B4 369 aa21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 SYNE4Q8N205 404 aa21.38■■□□□ 1.01
PDLIM2-217ENST00000491330 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 BBOX1O75936 387 aa21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 KRT24Q2M2I5 525 aa21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 LRP10Q7Z4F1 713 aa21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 NLRP10Q86W26 655 aa21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 PSMD1Q99460 953 aa21.37■■□□□ 1.01
PDLIM2-217ENST00000491330 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 SUPT20HQ8NEM7 779 aa21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 ANKRD31Q8N7Z5 1873 aa21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
PDLIM2-217ENST00000491330 ELL2O00472 640 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-217ENST00000491330 PRELPP51888 382 aa21.35■■□□□ 1.01
PDLIM2-217ENST00000491330 EIF6P56537 245 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-217ENST00000491330 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
PDLIM2-217ENST00000491330 TMC4Q7Z404 712 aa21.34■■□□□ 1.01
PDLIM2-217ENST00000491330 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-217ENST00000491330 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
PDLIM2-217ENST00000491330 DDNO94850 711 aaPredicted RBP21.32■■□□□ 1
PDLIM2-217ENST00000491330 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
PDLIM2-217ENST00000491330 HCLS1P14317 486 aaPredicted RBP21.31■■□□□ 1
PDLIM2-217ENST00000491330 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
PDLIM2-217ENST00000491330 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
PDLIM2-217ENST00000491330 COL11A2P13942 1736 aaPredicted RBP21.3■■□□□ 1
PDLIM2-217ENST00000491330 TRIM28Q13263 835 aaKnown RBP21.3■■□□□ 1
PDLIM2-217ENST00000491330 NIM1KQ8IY84 436 aa21.3■■□□□ 1
PDLIM2-217ENST00000491330 SBF1O95248 1867 aa21.3■■□□□ 1
PDLIM2-217ENST00000491330 SLX4Q8IY92 1834 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 LMOD1P29536 600 aaPredicted RBP21.29■■□□□ 1
PDLIM2-217ENST00000491330 NEXNQ0ZGT2 675 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 DPP8Q6V1X1 898 aaPredicted RBP21.29■■□□□ 1
PDLIM2-217ENST00000491330 PNMA8AQ86V59 439 aaPredicted RBP21.29■■□□□ 1
PDLIM2-217ENST00000491330 WWC1Q8IX03 1113 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 SP8Q8IXZ3 490 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 NUP98P52948 1817 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 IL16Q14005 1332 aa21.29■■□□□ 1
PDLIM2-217ENST00000491330 ATP5J2-PTCD1G3V325 749 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 GRAPQ13588 217 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 CHADLQ6NUI6 762 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 OLFM4Q6UX06 510 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 GPC2Q8N158 579 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 GRAPLQ8TC17 118 aaPredicted RBP21.28■■□□□ 1
PDLIM2-217ENST00000491330 L3MBTL3Q96JM7 780 aaPredicted RBP21.28■■□□□ 1
PDLIM2-217ENST00000491330 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 HACL1Q9UJ83 578 aa21.28■■□□□ 1
PDLIM2-217ENST00000491330 PPIP5K2O43314 1243 aa21.27■■□□□ 1
PDLIM2-217ENST00000491330 MPNDQ8N594 471 aa21.27■■□□□ 1
PDLIM2-217ENST00000491330 FAM89AQ96GI7 184 aa21.27■■□□□ 1
PDLIM2-217ENST00000491330 CLEC11AQ9Y240 323 aa21.27■■□□□ 1
PDLIM2-217ENST00000491330 ABCC4O15439 1325 aa21.27■□□□□ 0.99
PDLIM2-217ENST00000491330 FZD9O00144 591 aa21.26■□□□□ 0.99
PDLIM2-217ENST00000491330 C8orf58Q8NAV2 365 aa21.26■□□□□ 0.99
PDLIM2-217ENST00000491330 CCDC191Q8NCU4 936 aa21.26■□□□□ 0.99
PDLIM2-217ENST00000491330 FER1L6Q2WGJ9 1857 aa21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 ZBTB38Q8NAP3 1195 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 MYD88Q99836 296 aa21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
PDLIM2-217ENST00000491330 ARFGEF2Q9Y6D5 1785 aa21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 IRS4O14654 1257 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 CCDC184Q52MB2 194 aa21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 EAPPQ56P03 285 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 CWC25Q9NXE8 425 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-217ENST00000491330 SF3B3Q15393 1217 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-217ENST00000491330 TSR2Q969E8 191 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-217ENST00000491330 TAF1DQ9H5J8 278 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-217ENST00000491330 TIAM2Q8IVF5 1701 aa21.23■□□□□ 0.99
PDLIM2-217ENST00000491330 POTECB2RU33 542 aa21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 EPHX2P34913 555 aa21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms