RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 TIAM2Q8IVF5 1701 aa20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 ANP32CO43423 234 aa20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 CALD1Q05682 793 aaKnown RBP20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 DBF4Q9UBU7 674 aaPredicted RBP20.87■□□□□ 0.93
ARHGEF39-206ENST00000490970 TCIRG1Q13488 830 aa20.86■□□□□ 0.93
ARHGEF39-206ENST00000490970 HSP90AB3PQ58FF7 597 aa20.86■□□□□ 0.93
ARHGEF39-206ENST00000490970 NLRP10Q86W26 655 aa20.86■□□□□ 0.93
ARHGEF39-206ENST00000490970 RPGRQ92834 1020 aaKnown RBP20.86■□□□□ 0.93
ARHGEF39-206ENST00000490970 MRS2Q9HD23 443 aa20.86■□□□□ 0.93
ARHGEF39-206ENST00000490970 HOXA10P31260 410 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF39-206ENST00000490970 RBM46Q8TBY0 533 aaKnown RBP20.85■□□□□ 0.93
ARHGEF39-206ENST00000490970 ZNF428Q96B54 188 aa20.85■□□□□ 0.93
ARHGEF39-206ENST00000490970 RIC1Q4ADV7 1423 aa20.85■□□□□ 0.93
ARHGEF39-206ENST00000490970 DICER1Q9UPY3 1922 aaKnown RBP20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 FKBP4Q02790 459 aaKnown RBP eCLIP20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 SLC10A5Q5PT55 438 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 DPY19L2Q6NUT2 758 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 RTKN2Q8IZC4 609 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 SYNE4Q8N205 404 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 C8orf58Q8NAV2 365 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 ZNF277Q9NRM2 450 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF39-206ENST00000490970 VEGFAP15692 232 aaPredicted RBP20.83■□□□□ 0.93
ARHGEF39-206ENST00000490970 PLBD2Q8NHP8 589 aa20.83■□□□□ 0.93
ARHGEF39-206ENST00000490970 RBM17Q96I25 401 aaKnown RBP20.83■□□□□ 0.93
ARHGEF39-206ENST00000490970 HYPKQ9NX55 129 aa20.83■□□□□ 0.93
ARHGEF39-206ENST00000490970 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 POTECB2RU33 542 aa20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 TCERG1O14776 1098 aaKnown RBP20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 CRAMP1Q96RY5 1269 aa20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 TRMT112Q9UI30 125 aaKnown RBP20.82■□□□□ 0.92
ARHGEF39-206ENST00000490970 DDNO94850 711 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF39-206ENST00000490970 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF39-206ENST00000490970 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
ARHGEF39-206ENST00000490970 PHAXQ9H814 394 aaKnown RBP20.8■□□□□ 0.92
ARHGEF39-206ENST00000490970 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
ARHGEF39-206ENST00000490970 TSPYL6Q8N831 410 aa20.79■□□□□ 0.92
ARHGEF39-206ENST00000490970 TSR2Q969E8 191 aaKnown RBP20.79■□□□□ 0.92
ARHGEF39-206ENST00000490970 ISCA1Q9BUE6 129 aa20.79■□□□□ 0.92
ARHGEF39-206ENST00000490970 RNF123Q5XPI4 1314 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 PPEF1O14829 653 aaPredicted RBP20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 IARSP41252 1262 aaKnown RBP20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 FSTL1Q12841 308 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 CCDC27Q2M243 656 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 SNED1Q8TER0 1413 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
ARHGEF39-206ENST00000490970 APLP1P51693 650 aa20.77■□□□□ 0.92
ARHGEF39-206ENST00000490970 PSMD1Q99460 953 aa20.77■□□□□ 0.92
ARHGEF39-206ENST00000490970 SALL2Q9Y467 1007 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF39-206ENST00000490970 WDR90Q96KV7 1748 aa20.77■□□□□ 0.92
ARHGEF39-206ENST00000490970 ABCC4O15439 1325 aa20.77■□□□□ 0.91
ARHGEF39-206ENST00000490970 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
ARHGEF39-206ENST00000490970 SMC1BQ8NDV3 1235 aa20.76■□□□□ 0.91
ARHGEF39-206ENST00000490970 FAM89AQ96GI7 184 aa20.76■□□□□ 0.91
ARHGEF39-206ENST00000490970 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
ARHGEF39-206ENST00000490970 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
ARHGEF39-206ENST00000490970 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
ARHGEF39-206ENST00000490970 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
ARHGEF39-206ENST00000490970 ATP6V0A2Q9Y487 856 aa20.74■□□□□ 0.91
ARHGEF39-206ENST00000490970 LAMB2P55268 1798 aa20.74■□□□□ 0.91
ARHGEF39-206ENST00000490970 HTRA3P83110 453 aa20.73■□□□□ 0.91
ARHGEF39-206ENST00000490970 DDX46Q7L014 1031 aaKnown RBP20.73■□□□□ 0.91
ARHGEF39-206ENST00000490970 BBOX1O75936 387 aa20.72■□□□□ 0.91
ARHGEF39-206ENST00000490970 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
ARHGEF39-206ENST00000490970 GRIPAP1Q4V328 841 aa20.72■□□□□ 0.91
ARHGEF39-206ENST00000490970 MYD88Q99836 296 aa20.72■□□□□ 0.91
ARHGEF39-206ENST00000490970 FZD9O00144 591 aa20.71■□□□□ 0.91
ARHGEF39-206ENST00000490970 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
ARHGEF39-206ENST00000490970 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
ARHGEF39-206ENST00000490970 JDP2Q8WYK2 163 aa20.71■□□□□ 0.91
ARHGEF39-206ENST00000490970 TMX4Q9H1E5 349 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF39-206ENST00000490970 POTEIP0CG38 1075 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 POTEJP0CG39 1038 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 GRAPQ13588 217 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 TWISTNBQ3B726 338 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 SP8Q8IXZ3 490 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 LARGE2Q8N3Y3 721 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 CHMP4AQ9BY43 222 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 IL16Q14005 1332 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 COL4A5P29400 1685 aa20.7■□□□□ 0.9
ARHGEF39-206ENST00000490970 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
ARHGEF39-206ENST00000490970 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
ARHGEF39-206ENST00000490970 L3MBTL3Q96JM7 780 aaPredicted RBP20.69■□□□□ 0.9
ARHGEF39-206ENST00000490970 DDX60Q8IY21 1712 aaKnown RBP20.69■□□□□ 0.9
ARHGEF39-206ENST00000490970 TAF1P21675 1872 aa20.69■□□□□ 0.9
ARHGEF39-206ENST00000490970 SF3B3Q15393 1217 aaKnown RBP20.68■□□□□ 0.9
ARHGEF39-206ENST00000490970 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
ARHGEF39-206ENST00000490970 METTL22Q9BUU2 404 aaPredicted RBP20.68■□□□□ 0.9
ARHGEF39-206ENST00000490970 IQCA1LA6NCM1 817 aa20.67■□□□□ 0.9
ARHGEF39-206ENST00000490970 PPIP5K2O43314 1243 aa20.67■□□□□ 0.9
ARHGEF39-206ENST00000490970 DDX58O95786 925 aaKnown RBP20.67■□□□□ 0.9
ARHGEF39-206ENST00000490970 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
ARHGEF39-206ENST00000490970 AOC3Q16853 763 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms