RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 PLA2G12BQ9BX93 195 aa11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 NIP7Q9Y221 180 aaKnown RBP eCLIP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 ZC3H4Q9UPT8 1303 aaKnown RBP11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 PDE6BP35913 854 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 CRAMP1Q96RY5 1269 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
SUPT20H-220ENST00000490716 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 CCDC30Q5VVM6 783 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 H7C1W4 665 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
SUPT20H-220ENST00000490716 NPR1P16066 1061 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 POTECB2RU33 542 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 E9PSI1 815 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 C2CD5Q86YS7 1000 aa11.91□□□□□ -0.5
SUPT20H-220ENST00000490716 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 TPTE2Q6XPS3 522 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 CCDC191Q8NCU4 936 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 CT47B1P0C2W7 299 aaPredicted RBP11.9□□□□□ -0.5
SUPT20H-220ENST00000490716 ABCC4O15439 1325 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 PRPF40BQ6NWY9 871 aaKnown RBP11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 TTLL6Q8N841 843 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 CSF1RP07333 972 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 ALDH1L2Q3SY69 923 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 PSMD1Q99460 953 aa11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SUPT20H-220ENST00000490716 FLIIQ13045 1269 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 ST5P78524 1137 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 H0YIN7 160 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 BICDL1Q6ZP65 573 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
SUPT20H-220ENST00000490716 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
SUPT20H-220ENST00000490716 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
SUPT20H-220ENST00000490716 FOXO4P98177 505 aa11.87□□□□□ -0.51
SUPT20H-220ENST00000490716 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
SUPT20H-220ENST00000490716 MAP3K2Q9Y2U5 619 aa11.87□□□□□ -0.51
SUPT20H-220ENST00000490716 TRPM7Q96QT4 1865 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 MYH13Q9UKX3 1938 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 KIF3CO14782 793 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 GCKRQ14397 625 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
SUPT20H-220ENST00000490716 FZD9O00144 591 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 GPTP24298 496 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 RASSF7Q02833 373 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 CNKSR1Q969H4 720 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 ZBTB22O15209 634 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 PTPRCP08575 1304 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 SSH1Q8WYL5 1049 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
SUPT20H-220ENST00000490716 GPR162Q16538 588 aa11.84□□□□□ -0.51
SUPT20H-220ENST00000490716 FKBP4Q02790 459 aaKnown RBP eCLIP11.84□□□□□ -0.51
SUPT20H-220ENST00000490716 RABL6Q3YEC7 729 aaPredicted RBP11.84□□□□□ -0.51
SUPT20H-220ENST00000490716 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
SUPT20H-220ENST00000490716 YY1P25490 414 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 GRAPQ13588 217 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms