RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 HDAC5Q9UQL6 1122 aa25.11■■□□□ 1.61
SHROOM3-209ENST00000490690 NEURL1BA8MQ27 555 aa25.1■■□□□ 1.61
SHROOM3-209ENST00000490690 BEND3Q5T5X7 828 aa25.1■■□□□ 1.61
SHROOM3-209ENST00000490690 TRMT112Q9UI30 125 aaKnown RBP25.1■■□□□ 1.61
SHROOM3-209ENST00000490690 UBN2Q6ZU65 1347 aa25.1■■□□□ 1.61
SHROOM3-209ENST00000490690 SH3TC1Q8TE82 1336 aa25.1■■□□□ 1.61
SHROOM3-209ENST00000490690 ATP5J2-PTCD1G3V325 749 aa25.09■■□□□ 1.61
SHROOM3-209ENST00000490690 CENPBP07199 599 aaPredicted RBP25.09■■□□□ 1.61
SHROOM3-209ENST00000490690 TRIM27P14373 513 aa25.09■■□□□ 1.61
SHROOM3-209ENST00000490690 ANKRD36CQ5JPF3 1778 aa25.08■■□□□ 1.61
SHROOM3-209ENST00000490690 SUSD4Q5VX71 490 aa25.08■■□□□ 1.61
SHROOM3-209ENST00000490690 DZIP1LQ8IYY4 767 aaKnown RBP25.08■■□□□ 1.61
SHROOM3-209ENST00000490690 ZBTB38Q8NAP3 1195 aaPredicted RBP25.08■■□□□ 1.61
SHROOM3-209ENST00000490690 CD2APQ9Y5K6 639 aa25.08■■□□□ 1.61
SHROOM3-209ENST00000490690 ABCC4O15439 1325 aa25.08■■□□□ 1.6
SHROOM3-209ENST00000490690 NTSR2O95665 410 aa25.07■■□□□ 1.6
SHROOM3-209ENST00000490690 PCCAP05165 728 aaPredicted RBP25.07■■□□□ 1.6
SHROOM3-209ENST00000490690 IGKV5-2P06315 115 aa25.07■■□□□ 1.6
SHROOM3-209ENST00000490690 CHMP4BQ9H444 224 aaKnown RBP25.07■■□□□ 1.6
SHROOM3-209ENST00000490690 RIC1Q4ADV7 1423 aa25.06■■□□□ 1.6
SHROOM3-209ENST00000490690 LRP5O75197 1615 aa25.06■■□□□ 1.6
SHROOM3-209ENST00000490690 PDE6BP35913 854 aa25.06■■□□□ 1.6
SHROOM3-209ENST00000490690 GCKRQ14397 625 aa25.06■■□□□ 1.6
SHROOM3-209ENST00000490690 PRR5LQ6MZQ0 368 aa25.06■■□□□ 1.6
SHROOM3-209ENST00000490690 PDE3AQ14432 1141 aa25.05■■□□□ 1.6
SHROOM3-209ENST00000490690 INTS3Q68E01 1043 aaKnown RBP25.05■■□□□ 1.6
SHROOM3-209ENST00000490690 BRIP1Q9BX63 1249 aa25.05■■□□□ 1.6
SHROOM3-209ENST00000490690 C9orf78Q9NZ63 289 aaPredicted RBP25.05■■□□□ 1.6
SHROOM3-209ENST00000490690 CWF19L2Q2TBE0 894 aaKnown RBP25.04■■□□□ 1.6
SHROOM3-209ENST00000490690 CDHR2Q9BYE9 1310 aa25.04■■□□□ 1.6
SHROOM3-209ENST00000490690 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
SHROOM3-209ENST00000490690 FAM177BA6PVY3 158 aa25.03■■□□□ 1.6
SHROOM3-209ENST00000490690 TGFB2P61812 414 aa25.03■■□□□ 1.6
SHROOM3-209ENST00000490690 SLC10A5Q5PT55 438 aa25.03■■□□□ 1.6
SHROOM3-209ENST00000490690 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
SHROOM3-209ENST00000490690 GRM8O00222 908 aa25.02■■□□□ 1.6
SHROOM3-209ENST00000490690 NLRP3Q96P20 1036 aa25.01■■□□□ 1.59
SHROOM3-209ENST00000490690 H7C1W4 665 aa25■■□□□ 1.59
SHROOM3-209ENST00000490690 RRP1P56182 461 aaKnown RBP25■■□□□ 1.59
SHROOM3-209ENST00000490690 CLUAP1Q96AJ1 413 aa25■■□□□ 1.59
SHROOM3-209ENST00000490690 IRS4O14654 1257 aaPredicted RBP24.99■■□□□ 1.59
SHROOM3-209ENST00000490690 GNAI3P08754 354 aa24.99■■□□□ 1.59
SHROOM3-209ENST00000490690 ERFEQ4G0M1 354 aa24.99■■□□□ 1.59
SHROOM3-209ENST00000490690 NUTM1Q86Y26 1132 aa24.99■■□□□ 1.59
SHROOM3-209ENST00000490690 FAM89AQ96GI7 184 aa24.99■■□□□ 1.59
SHROOM3-209ENST00000490690 UTYO14607 1347 aa24.98■■□□□ 1.59
SHROOM3-209ENST00000490690 H0YIN7 160 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 PDE8AO60658 829 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 UBE3BQ7Z3V4 1068 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 ITPRIPQ8IWB1 547 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 KLHL34Q8N239 644 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 PLA2G12BQ9BX93 195 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 DDX19BQ9UMR2 479 aa24.97■■□□□ 1.59
SHROOM3-209ENST00000490690 KLRG2A4D1S0 409 aaPredicted RBP24.96■■□□□ 1.59
SHROOM3-209ENST00000490690 TMEM57Q8N5G2 664 aa24.96■■□□□ 1.59
SHROOM3-209ENST00000490690 UBTFL1P0CB47 393 aaPredicted RBP24.95■■□□□ 1.58
SHROOM3-209ENST00000490690 N4BP2Q86UW6 1770 aaPredicted RBP24.95■■□□□ 1.58
SHROOM3-209ENST00000490690 AFDNP55196 1824 aaKnown RBP24.94■■□□□ 1.58
SHROOM3-209ENST00000490690 FHDC1Q9C0D6 1143 aaPredicted RBP24.94■■□□□ 1.58
SHROOM3-209ENST00000490690 ABCC12Q96J65 1359 aa24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 MVPQ14764 893 aaKnown RBP24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 CRY2Q49AN0 593 aa24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 CCDC152Q4G0S7 254 aa24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 RPGRQ92834 1020 aaKnown RBP24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 USP44Q9H0E7 712 aa24.93■■□□□ 1.58
SHROOM3-209ENST00000490690 PLIN1O60240 522 aa24.92■■□□□ 1.58
SHROOM3-209ENST00000490690 NPR1P16066 1061 aa24.92■■□□□ 1.58
SHROOM3-209ENST00000490690 SF3B3Q15393 1217 aaKnown RBP24.92■■□□□ 1.58
SHROOM3-209ENST00000490690 C2CD5Q86YS7 1000 aa24.92■■□□□ 1.58
SHROOM3-209ENST00000490690 MASTLQ96GX5 879 aa24.92■■□□□ 1.58
SHROOM3-209ENST00000490690 HCLS1P14317 486 aaPredicted RBP24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 ALDH1B1P30837 517 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 CASP7P55210 303 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 RTL5Q5HYW3 569 aaPredicted RBP24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 STYK1Q6J9G0 422 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 CNKSR1Q969H4 720 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 RBM17Q96I25 401 aaKnown RBP24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 SYT17Q9BSW7 474 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 KIF13BQ9NQT8 1826 aa24.91■■□□□ 1.58
SHROOM3-209ENST00000490690 CTSWP56202 376 aa24.9■■□□□ 1.58
SHROOM3-209ENST00000490690 PANK1Q8TE04 598 aa24.9■■□□□ 1.58
SHROOM3-209ENST00000490690 NBPF7P0C2Y1 421 aaPredicted RBP24.89■■□□□ 1.58
SHROOM3-209ENST00000490690 SRGNP10124 158 aa24.89■■□□□ 1.58
SHROOM3-209ENST00000490690 RLBP1P12271 317 aa24.89■■□□□ 1.58
SHROOM3-209ENST00000490690 DDX46Q7L014 1031 aaKnown RBP24.89■■□□□ 1.58
SHROOM3-209ENST00000490690 HOXA10P31260 410 aaPredicted RBP24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 AAMPQ13685 434 aa24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 CCDC24Q8N4L8 307 aa24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 PIM2Q9P1W9 311 aa24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 TNNQ9UQP3 1299 aa24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
SHROOM3-209ENST00000490690 GNAI2P04899 355 aa24.87■■□□□ 1.57
SHROOM3-209ENST00000490690 TMC4Q7Z404 712 aa24.87■■□□□ 1.57
SHROOM3-209ENST00000490690 CRAMP1Q96RY5 1269 aa24.87■■□□□ 1.57
SHROOM3-209ENST00000490690 RTL9Q8NET4 1388 aa24.87■■□□□ 1.57
SHROOM3-209ENST00000490690 LAMB2P55268 1798 aa24.86■■□□□ 1.57
SHROOM3-209ENST00000490690 SYNE4Q8N205 404 aa24.86■■□□□ 1.57
SHROOM3-209ENST00000490690 CDC5LQ99459 802 aaKnown RBP24.86■■□□□ 1.57
SHROOM3-209ENST00000490690 MEIS3Q99687 375 aa24.86■■□□□ 1.57
SHROOM3-209ENST00000490690 TMX4Q9H1E5 349 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms