RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 FIBPO43427 364 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 CYP7A1P22680 504 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 TXLNAP40222 546 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 SLC4A8Q2Y0W8 1093 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 KIF1BO60333 1816 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 SIK1P57059 783 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 HAND2P61296 217 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 DDX11Q96FC9 970 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 CEP89Q96ST8 783 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 EYA3Q99504 573 aa16.97■□□□□ 0.31
ARHGEF39-205ENST00000490638 TET3O43151 1660 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 R3HCC1Q9Y3T6 440 aaKnown RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 SASS6Q6UVJ0 657 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 IFIT3O14879 490 aaKnown RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
ARHGEF39-205ENST00000490638 TPM1P09493 284 aa16.96■□□□□ 0.3
ARHGEF39-205ENST00000490638 JMYQ8N9B5 988 aa16.96■□□□□ 0.3
ARHGEF39-205ENST00000490638 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.3
ARHGEF39-205ENST00000490638 CRNKL1Q9BZJ0 848 aaKnown RBP16.96■□□□□ 0.3
ARHGEF39-205ENST00000490638 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 GSTO1P78417 241 aa16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
ARHGEF39-205ENST00000490638 CCDC196A0A1B0GTZ2 297 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 TSPY2A6NKD2 308 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 CERKQ8TCT0 537 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 PDE1AP54750 535 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 PDE8AO60658 829 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 KINO60870 393 aaKnown RBP16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 PDE4BQ07343 736 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
ARHGEF39-205ENST00000490638 ADGRL3Q9HAR2 1447 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 H0YIN7 160 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 USP19O94966 1318 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 ATP7BP35670 1465 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 TPM3P06753 285 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 ITGA6P23229 1130 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 ZNF76P36508 570 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
ARHGEF39-205ENST00000490638 SEC63Q9UGP8 760 aaKnown RBP16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 TIMM10P62072 90 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 PDE4CQ08493 712 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 FLAD1Q8NFF5 587 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 TFCP2Q12800 502 aa16.92■□□□□ 0.3
ARHGEF39-205ENST00000490638 EYA2O00167 538 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 ME1P48163 572 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 TMEM132AQ24JP5 1023 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 WASF1Q92558 559 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 NAP1L5Q96NT1 182 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 UFL1O94874 794 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
ARHGEF39-205ENST00000490638 NUCB1Q02818 461 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 GCKRQ14397 625 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 KCNQ4P56696 695 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
ARHGEF39-205ENST00000490638 AFF2P51816 1311 aa16.89■□□□□ 0.3
ARHGEF39-205ENST00000490638 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms