RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 AIMP1Q12904 312 aaKnown RBP21.79■■□□□ 1.08
RAPGEF3-212ENST00000490387 HLFQ16534 295 aa21.79■■□□□ 1.08
RAPGEF3-212ENST00000490387 KIF6Q6ZMV9 814 aa21.79■■□□□ 1.08
RAPGEF3-212ENST00000490387 KIF3CO14782 793 aa21.78■■□□□ 1.08
RAPGEF3-212ENST00000490387 TPTE2Q6XPS3 522 aa21.78■■□□□ 1.08
RAPGEF3-212ENST00000490387 PLBD2Q8NHP8 589 aa21.78■■□□□ 1.08
RAPGEF3-212ENST00000490387 FAM177BA6PVY3 158 aa21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 BCAR3O75815 825 aa21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 ANKRD13DQ6ZTN6 518 aa21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 ZBTB3Q9H5J0 574 aa21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
RAPGEF3-212ENST00000490387 SLX4Q8IY92 1834 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 SRGNP10124 158 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 LMNB1P20700 586 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 STYK1Q6J9G0 422 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 RCAN3Q9UKA8 241 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 PTPRCP08575 1304 aa21.76■■□□□ 1.07
RAPGEF3-212ENST00000490387 FER1L6Q2WGJ9 1857 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 C21orf2O43822 256 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 GIGYF2Q6Y7W6 1299 aaKnown RBP21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 NMRK2Q9NPI5 230 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 KDM2BQ8NHM5 1336 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 KIF16BQ96L93 1317 aa21.75■■□□□ 1.07
RAPGEF3-212ENST00000490387 DDX58O95786 925 aaKnown RBP21.74■■□□□ 1.07
RAPGEF3-212ENST00000490387 GTF2E1P29083 439 aaPredicted RBP21.74■■□□□ 1.07
RAPGEF3-212ENST00000490387 FKBP5Q13451 457 aaPredicted RBP21.74■■□□□ 1.07
RAPGEF3-212ENST00000490387 KSR2Q6VAB6 950 aa21.74■■□□□ 1.07
RAPGEF3-212ENST00000490387 PI4KAP2A4QPH2 592 aa21.73■■□□□ 1.07
RAPGEF3-212ENST00000490387 NFKBIEO00221 500 aa21.73■■□□□ 1.07
RAPGEF3-212ENST00000490387 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
RAPGEF3-212ENST00000490387 PI4KAP1Q8N8J0 262 aa21.73■■□□□ 1.07
RAPGEF3-212ENST00000490387 ZC3H4Q9UPT8 1303 aaKnown RBP21.73■■□□□ 1.07
RAPGEF3-212ENST00000490387 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
RAPGEF3-212ENST00000490387 NYXQ9GZU5 481 aa21.72■■□□□ 1.07
RAPGEF3-212ENST00000490387 NOB1Q9ULX3 412 aaKnown RBP21.72■■□□□ 1.07
RAPGEF3-212ENST00000490387 MAP3K2Q9Y2U5 619 aa21.72■■□□□ 1.07
RAPGEF3-212ENST00000490387 DICER1Q9UPY3 1922 aaKnown RBP21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 NPR1P16066 1061 aa21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 PRELPP51888 382 aa21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 RIC3Q7Z5B4 369 aa21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 ZNF34Q8IZ26 560 aa21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 ARHGAP45Q92619 1136 aa21.71■■□□□ 1.07
RAPGEF3-212ENST00000490387 GPTP24298 496 aa21.7■■□□□ 1.06
RAPGEF3-212ENST00000490387 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
RAPGEF3-212ENST00000490387 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
RAPGEF3-212ENST00000490387 C16orf71Q8IYS4 520 aaPredicted RBP21.7■■□□□ 1.06
RAPGEF3-212ENST00000490387 METTL22Q9BUU2 404 aaPredicted RBP21.7■■□□□ 1.06
RAPGEF3-212ENST00000490387 F6X3S4 739 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 TOMM70O94826 608 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 HSPA6P17066 643 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 HSP90AB3PQ58FF7 597 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 NUTM1Q86Y26 1132 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 DNAAF4Q8WXU2 420 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 ISCA1Q9BUE6 129 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 TAOK3Q9H2K8 898 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 UBN2Q6ZU65 1347 aa21.69■■□□□ 1.06
RAPGEF3-212ENST00000490387 KLRG2A4D1S0 409 aaPredicted RBP21.68■■□□□ 1.06
RAPGEF3-212ENST00000490387 ABCC12Q96J65 1359 aa21.68■■□□□ 1.06
RAPGEF3-212ENST00000490387 IBTKQ9P2D0 1353 aaPredicted RBP21.68■■□□□ 1.06
RAPGEF3-212ENST00000490387 LTBP3Q9NS15 1303 aa21.67■■□□□ 1.06
RAPGEF3-212ENST00000490387 TRIM27P14373 513 aa21.67■■□□□ 1.06
RAPGEF3-212ENST00000490387 TRIM28Q13263 835 aaKnown RBP21.67■■□□□ 1.06
RAPGEF3-212ENST00000490387 RRAGCQ9HB90 399 aa21.67■■□□□ 1.06
RAPGEF3-212ENST00000490387 IGKV5-2P06315 115 aa21.66■■□□□ 1.06
RAPGEF3-212ENST00000490387 ERFEQ4G0M1 354 aa21.66■■□□□ 1.06
RAPGEF3-212ENST00000490387 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
RAPGEF3-212ENST00000490387 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
RAPGEF3-212ENST00000490387 ABCC4O15439 1325 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 GLTPD2A6NH11 291 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 IPO8O15397 1037 aaKnown RBP21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 CCDC93Q567U6 631 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 BEND3Q5T5X7 828 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 SUSD4Q5VX71 490 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 ZKSCAN2Q63HK3 967 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 MYD88Q99836 296 aa21.65■■□□□ 1.06
RAPGEF3-212ENST00000490387 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 ALDH1B1P30837 517 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 PARP10Q53GL7 1025 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 PPP1R42Q7Z4L9 355 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 TNNQ9UQP3 1299 aa21.64■■□□□ 1.05
RAPGEF3-212ENST00000490387 LINS1Q8NG48 757 aa21.63■■□□□ 1.05
RAPGEF3-212ENST00000490387 RBM46Q8TBY0 533 aaKnown RBP21.63■■□□□ 1.05
RAPGEF3-212ENST00000490387 C7orf43Q8WVR3 580 aa21.63■■□□□ 1.05
RAPGEF3-212ENST00000490387 RIC1Q4ADV7 1423 aa21.63■■□□□ 1.05
RAPGEF3-212ENST00000490387 NEURL1BA8MQ27 555 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 NTSR2O95665 410 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 NEXNQ0ZGT2 675 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 CRY2Q49AN0 593 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 CCDC191Q8NCU4 936 aa21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 RPGRQ92834 1020 aaKnown RBP21.62■■□□□ 1.05
RAPGEF3-212ENST00000490387 CWF19L2Q2TBE0 894 aaKnown RBP21.61■■□□□ 1.05
RAPGEF3-212ENST00000490387 RNF123Q5XPI4 1314 aa21.6■■□□□ 1.05
RAPGEF3-212ENST00000490387 SLC4A10Q6U841 1118 aa21.6■■□□□ 1.05
RAPGEF3-212ENST00000490387 UTP14AQ9BVJ6 771 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms