RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 RNF187Q5TA31 235 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TMC6Q7Z403 805 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 FAM177A1Q8N128 213 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 C8orf76Q96K31 380 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 C16orf45Q96MC5 204 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 NUP88Q99567 741 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CNNM1Q9NRU3 951 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 STK32BQ9NY57 414 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 RNF17Q9BXT8 1623 aaKnown RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 A0A087WZG4 1122 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CTAGE15A4D2H0 777 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC172P0C7W6 258 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CTAGE8P0CG41 777 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 GJB2P29033 226 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 LMOD1P29536 600 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 LMAN1P49257 510 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 SKIDA1Q1XH10 827 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TBC1D9Q6ZT07 1266 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TTC21BQ7Z4L5 1316 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CTAGE6Q86UF2 777 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CTAGE4Q8IX94 777 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 INTS4Q96HW7 963 aaKnown RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TTC14Q96N46 770 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CDK19Q9BWU1 502 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 RNF41Q9H4P4 317 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 PARD3Q8TEW0 1356 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 GNAT3A8MTJ3 354 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 MYO1BO43795 1136 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.733e-6■■■■□ 23
RPS6KC1-204ENST00000490299 SSRP1Q08945 709 aaKnown RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 AIMP1Q12904 312 aaKnown RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CFAP70Q5T0N1 1121 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 ANKS4BQ8N8V4 417 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 KCNG4Q8TDN1 519 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 ANKRD24Q8TF21 1146 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 RASAL2Q9UJF2 1139 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 LMTK3Q96Q04 1460 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 SOS1Q07889 1333 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 A0A1B0GUL7 405 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TMEM266Q2M3C6 531 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 PRPF40BQ6NWY9 871 aaKnown RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 POTEDQ86YR6 584 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 FSIP1Q8NA03 581 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CNNM3Q8NE01 707 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC12Q8WUD4 166 aaPredicted RBP4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 TSGA10Q9BZW7 698 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 PIK3R4Q99570 1358 aa4.27□□□□□ -1.73
RPS6KC1-204ENST00000490299 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CYLC1P35663 651 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 TTF1Q15361 905 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC178Q5BJE1 867 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 MSL1Q68DK7 614 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CACNA2D4Q7Z3S7 1137 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 TTC12Q9H892 705 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CEP170Q5SW79 1584 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 UGGT1Q9NYU2 1555 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZFYVE9O95405 1425 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 PRG4Q92954 1404 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 RAD21O60216 631 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZNF165P49910 485 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC129Q6ZRS4 1044 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 ANKLE2Q86XL3 938 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 FMNL3Q8IVF7 1028 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC155Q8N6L0 562 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 ERO1AQ96HE7 468 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 EHMT1Q9H9B1 1298 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CDK13Q14004 1512 aaKnown RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 KDM6BO15054 1643 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 RAD50Q92878 1312 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 MYCNP04198 464 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 KRT83P78385 493 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 KIF22Q14807 665 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 ARFGAP2Q8N6H7 521 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 FBXO41Q8TF61 875 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 PRAM1Q96QH2 718 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 RASSF4Q9H2L5 321 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 TET3O43151 1660 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 TDO2P48775 406 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 LARP1Q6PKG0 1096 aaKnown RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CEP128Q6ZU80 1094 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 STXBP4Q6ZWJ1 553 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 POLR3AO14802 1390 aaPredicted RBP4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CHD1O14646 1710 aa4.26□□□□□ -1.73
RPS6KC1-204ENST00000490299 CTAGE9A4FU28 777 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZBTB24O43167 697 aaPredicted RBP4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 MNAT1P51948 309 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 SH3BGRP55822 239 aaPredicted RBP4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 NLRP6P59044 892 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 TNIP1Q15025 636 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 SULT6B1Q6IMI4 303 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 HDXQ7Z353 690 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 SELENOOQ9BVL4 669 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 PLVAPQ9BX97 442 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 RAI14Q9P0K7 980 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 CEP126Q9P2H0 1117 aa4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 SEC63Q9UGP8 760 aaKnown RBP4.25□□□□□ -1.73
RPS6KC1-204ENST00000490299 FYB1O15117 783 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms