RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 KCNQ3O43525 872 aa14.21□□□□□ -0.13
UBP1-211ENST00000490112 SRGNP10124 158 aa14.21□□□□□ -0.13
UBP1-211ENST00000490112 PRELPP51888 382 aa14.21□□□□□ -0.13
UBP1-211ENST00000490112 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
UBP1-211ENST00000490112 TAOK3Q9H2K8 898 aa14.21□□□□□ -0.13
UBP1-211ENST00000490112 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
UBP1-211ENST00000490112 FER1L6Q2WGJ9 1857 aa14.21□□□□□ -0.14
UBP1-211ENST00000490112 BCORQ6W2J9 1755 aa14.2□□□□□ -0.14
UBP1-211ENST00000490112 TAF7Q15545 349 aaPredicted RBP14.2□□□□□ -0.14
UBP1-211ENST00000490112 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
UBP1-211ENST00000490112 MCM10Q7L590 875 aa14.2□□□□□ -0.14
UBP1-211ENST00000490112 NUBP1P53384 320 aa14.19□□□□□ -0.14
UBP1-211ENST00000490112 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
UBP1-211ENST00000490112 COL11A2P13942 1736 aaPredicted RBP14.18□□□□□ -0.14
UBP1-211ENST00000490112 NPR1P16066 1061 aa14.18□□□□□ -0.14
UBP1-211ENST00000490112 HTRA3P83110 453 aa14.18□□□□□ -0.14
UBP1-211ENST00000490112 CCDC24Q8N4L8 307 aa14.18□□□□□ -0.14
UBP1-211ENST00000490112 PNISRQ8TF01 805 aaKnown RBP14.18□□□□□ -0.14
UBP1-211ENST00000490112 ARFGEF2Q9Y6D5 1785 aa14.17□□□□□ -0.14
UBP1-211ENST00000490112 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
UBP1-211ENST00000490112 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
UBP1-211ENST00000490112 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBP1-211ENST00000490112 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
UBP1-211ENST00000490112 IQCA1LA6NCM1 817 aa14.16□□□□□ -0.14
UBP1-211ENST00000490112 POTECB2RU33 542 aa14.16□□□□□ -0.14
UBP1-211ENST00000490112 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
UBP1-211ENST00000490112 CCDC93Q567U6 631 aa14.16□□□□□ -0.14
UBP1-211ENST00000490112 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
UBP1-211ENST00000490112 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
UBP1-211ENST00000490112 PIP4K2AP48426 406 aaPredicted RBP14.15□□□□□ -0.14
UBP1-211ENST00000490112 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
UBP1-211ENST00000490112 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
UBP1-211ENST00000490112 RTKN2Q8IZC4 609 aa14.15□□□□□ -0.14
UBP1-211ENST00000490112 NYXQ9GZU5 481 aa14.15□□□□□ -0.14
UBP1-211ENST00000490112 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
UBP1-211ENST00000490112 ERVV-1B6SEH8 477 aa14.14□□□□□ -0.15
UBP1-211ENST00000490112 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
UBP1-211ENST00000490112 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
UBP1-211ENST00000490112 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
UBP1-211ENST00000490112 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
UBP1-211ENST00000490112 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBP1-211ENST00000490112 FAM212AQ96EL1 285 aa14.13□□□□□ -0.15
UBP1-211ENST00000490112 DDNO94850 711 aaPredicted RBP14.12□□□□□ -0.15
UBP1-211ENST00000490112 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
UBP1-211ENST00000490112 LAMB4A4D0S4 1761 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 SCN4AP35499 1836 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 CC2D2BQ6DHV5 1058 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 CDAN1Q8IWY9 1227 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
UBP1-211ENST00000490112 HLFQ16534 295 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 MAP3K15Q6ZN16 1313 aa14.1□□□□□ -0.15
UBP1-211ENST00000490112 FAM177BA6PVY3 158 aa14.09□□□□□ -0.15
UBP1-211ENST00000490112 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
UBP1-211ENST00000490112 COL13A1Q5TAT6 717 aaPredicted RBP14.09□□□□□ -0.15
UBP1-211ENST00000490112 PLEKHF1Q96S99 279 aa14.09□□□□□ -0.15
UBP1-211ENST00000490112 ERBB4Q15303 1308 aa14.09□□□□□ -0.15
UBP1-211ENST00000490112 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
UBP1-211ENST00000490112 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
UBP1-211ENST00000490112 DLG5Q8TDM6 1919 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 PLCG2P16885 1265 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 CRY2Q49AN0 593 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 PNMA8AQ86V59 439 aaPredicted RBP14.08□□□□□ -0.16
UBP1-211ENST00000490112 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
UBP1-211ENST00000490112 PSMD1Q99460 953 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 TAF1DQ9H5J8 278 aaPredicted RBP14.08□□□□□ -0.16
UBP1-211ENST00000490112 ZNF277Q9NRM2 450 aaPredicted RBP14.08□□□□□ -0.16
UBP1-211ENST00000490112 HACL1Q9UJ83 578 aa14.08□□□□□ -0.16
UBP1-211ENST00000490112 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
UBP1-211ENST00000490112 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 NUP98P52948 1817 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 HSPA1AP0DMV8 641 aaKnown RBP14.07□□□□□ -0.16
UBP1-211ENST00000490112 HSPA1BP0DMV9 641 aaKnown RBP14.07□□□□□ -0.16
UBP1-211ENST00000490112 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
UBP1-211ENST00000490112 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
UBP1-211ENST00000490112 TNS4Q8IZW8 715 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 BABAM1Q9NWV8 329 aa14.07□□□□□ -0.16
UBP1-211ENST00000490112 FZD9O00144 591 aa14.06□□□□□ -0.16
UBP1-211ENST00000490112 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
UBP1-211ENST00000490112 GPC2Q8N158 579 aa14.06□□□□□ -0.16
UBP1-211ENST00000490112 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
UBP1-211ENST00000490112 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
UBP1-211ENST00000490112 MYL6BP14649 208 aa14.05□□□□□ -0.16
UBP1-211ENST00000490112 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
UBP1-211ENST00000490112 PASKQ96RG2 1323 aa14.05□□□□□ -0.16
UBP1-211ENST00000490112 TMEM88BA6NKF7 163 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 ST18O60284 1047 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 EPHX2P34913 555 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
UBP1-211ENST00000490112 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
UBP1-211ENST00000490112 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms